RNA id: XM_039780953.1


Basic Information

Item Value
RNA id XM_039780953.1
length 8256
RNA type mRNA
GC content 0.49
exon number 29
gene id atad2b
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 13502644 ~ 13577416 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agggggagggagggagagagagatagacagggaGAGAAATGGCGCCTCGATGCTGCGCTCACTGAGGCAGTGTTTGGAGCTGGCTAGGGAGATTCAGTAAGGGCagacaaaaggaaaaaacatgGTGAACACAAGGAAAAGCTCACGGTCGGGGAGCGGTCCCTTCATCTCCTCGAGGACTAGATCGTCGTCGAGAAACGAGCGAAACTCTGATGAACATAAAGAGCCCAGTAGTGATGTGAGCAGTCCAAGCAGTCCGCGGCTGGCTCCCCCTTCCAAGCGCATGCGGCGCCAGACTGCCTCCGAGCCCAGCTCCAGTGATACCTCCCCATCCCCTCAGACCAAGGGCCAGAGGGTCAGCTGGGAAATTCCCACCTACCACACCAGGTTGTCCTCTCGCATAATGCAAAATGGACACGCCCATATGAGTCACCGGAACGAAGAGAGTGGAGGGGGAGATCACTCTCGCATGAATGGCCATGTGGAGCTGAAGAGGAGCTGCCGGGTGAAGAAGAGCCAATTTGAACACCTCAATCAGAGCCTGCTGTTTGACCAGCTGGTCAACAGcactgCTGAGGCGGTCCTTCAGGAGATGGACAACATCAGCAGCATCAGGCAGAACCGTGAGGTGGAGCGACTTCGCATGTGGACTAGAGACACTGAGGAGgaaaacaTGGACATGTATTCTCGGGTGAAGCGCAGAAAATCCATGCGCAGGGGCACTTTCAGCATGCCCAcacaccacaaagtcatgagcAAGACGGagcaggaggatgaagaggaggaagggacGGAAGATTCTCAcggtgaggaagaggaggatgcaGAGGATGAAGACGACGAAGGGGATGAAGCAGAAGAGGCGGGAGAGGAAAATGACAGGCCGTACAATCTGAGGCAGCGGAAGACGGTGCAGAGATATGAGGCACCACCTATTGAGCCTGTGAATAGAAAACAGAGCAACCCCTCACTTTTTGACACGCACAGATCCCCAGCAAGAAGAAGCCATATAAGAGTGAAGAAACATGCCATTCACAGCAGTGACACCACCTCGTCTTCTGATGAAGAGCGTTTTGAGCGGAGGAAAAGCAAAAGCATGACCCGGGCCAGGAACAGATGTTTGCCCATGAACCTGGCGTCAGAAGACCTGGCTAGTGGGGTGCTGCGTGATCGGGTGAAAGTGGGTGCCAGCTTGGCTGATGTGGATCCCATGAACCTTGATAGCTCAGTGAAATTTGACAATGTGGGTGGCCTCAGTAATCACATTCAGTCACTAAAGGAGATGGTCGTGTTCCCACTGCTTTATCCTGAGATCTTTGAGAAGTTTAAGATTCAGCCTCCCAGAGGGTGTTTGTTCTACGGCCCCCCGGGGACAGGAAAGACCCTGGTAGCACGGGCGCTTGCCAACGAGTGTAGCCAGGGAGACAGAAAAGTTTCCTTCTTCATGAGGAAAGGAGCCGACTGCCTCAGCAAGTGGGTCGGCGAATCAGAACGCCAGCTACGCCTGCTCTTTGACCAGGCTTACCTGATGAGGCCATCCATCATTTTCTTTGATGAGATTGATGGTTTGGCTCCTGTTCGCTCCAGCAGGCAAGACCAGATACACAGTTCTATTGTGTCCACTCTGCTGGCCTTGATGGACGGCTTGGACAGTCGTGGGGAGATAGTGGTCATTGGTGCTACAAACAGACTTGACTCTATCGACCCAGCACTCAGGAGGCCTGGACGCTTTGACCGGGAGTTTCTGTTCAACCTGCCCGACAAGAAGGCCAGAAAGCACATCTTGGAGATTCACACACGGGACTGGAATCCCAAATTGGCTGAGCCATTTGTAGATGAACTTGCAGAAAAATGTGTCGGCTACTGCGGTGCTGACATCAAAGCACTTTGCACAGAGACAGCCTTGGCGGCGTTGCGCCGCCGCTACCCCCAGATCTATGGCAGCAGCGTCAAACTGAAGCTGGATGTCGGCTCCATCGTCCTGGGGCCCGGCGACTTCAGCAAGGCCATGAGGACAATCGTCCCTGCTTCCCAGAGGGCCCTGGCTCCCCCTGGCCGTGCCCTGTCCCCCACCCTCAGGCCCCTGCTGGCCAGCTCTTTCtccttgttgctgaaagctcTGCTCCGAGTCTTCCCCCACGCTCAGTGTACTGACAGGGACAACACACGCGGCTCCGACAATCAACCGCTTGAAGAGGACGTGTACAGTGATGATGACAATGAAGAACGCTCTGCTTCCATCTATGAAGTCCAGCCTGCTGCATGCCCAAAGAGTCAGCACCCCTCTTCTGCAACGCACAGACCCTTCCTCCATTTCTCCTCCTCTGCCCTCCAACAGCCGACAGCCTACCGGCCTCGTCTGTTGCTGACCGGGCCCCCGGGCTCAGGACAGAGTTCCCACTTGGCCCCTGCCTTGCTGCACCACCTGGACAAGCTGCCAGTGCACCTCCTGGATTTGCCCACTCTCTACTCCGTCAGCGCTAAGACGCCAGAGGAGTCCTGTGCTCAGGTTTTCCGCGAGGCCCGCCGGAGCGTGCCCAGTGTGGTGTTCATGCCACATATCTCAGAGTGGTGGGAGATAGTGAGTGACACTGTGAAGAGCACCTTCCTCACCCTGCTGCACGATGTGCCCTCTTTCAGCCCTGTCCTTATCCTCGCCACTGCTGAGACCCACTACTCCCAGCTGTCGGACGAGGTGAGAAGTATTTTCCAGAGGACCTACGGGGAGGTAGTGACGCTGTGCCCTCCAGGAGCAGAGGACAGGAGGAGCTTCTTCGCCGACCTGCTGTTGGTCCAAGCGGCCAGGGCTCTGCCACGCTTCAGGAATAAGGAAAGGCGTGAAGAGGTACTGCCGATGGCCGAGGCTCCAGGCCCCCGAGTCCTGTCGGCAGAGGAACAGCGCCGCCTGGCTGAGCAGGAGGAGAACACACTACGAGAGCTCAGGCTCTTTCTCAGGGACGTGACCAAGCGCCTGGCCACTGACAAACGCTTCAACATCTTCAGCAAGCCAGTTGACATTGAGGAGGTGTCCGACTACCTGGAGGTTATTCGGCAGCCTATGGACCTGTCCACTGTCATGACCAAGATTGACACCCTCCAGTACCTGACAGTGAAGGACTTCCTCATGGACATCGATCTCATCTGCAGTAATGCGTTAGAATACAACCCTGACAAGGATCCCGGAGACAAGGTGATCAGGCACCGAGCATGCAGTTTAAAGGACACAGCCCATGCTATATTTGCTGCCGAGCTGGACCCCGAGTTCGACCGCATGTGTGAAGAGATCAAGGAGGCACGCAGGAAGAGGGACCCCCAGGCGCCAGCTCAGCTGACGGCGCTGATGGGCGCCGTGGCAACCAGAAAGCACCACACCGCAGGAGAGGAGCAGGCCAGGAGCAGCACTCAGGGCGAGGCCACGGACAAACGGTGCACCACTAATCACATAAAGCGGAAGATTCGCCGGCGACCATCTTGGGGGCGGGGCATCATCCGTAAGAAGAAGGTCTACAGGAAGGAaatggaagaagaagaggaggaggaggaggaggagggggaggagggggaggaggaggagggggcggAGGTGGAAGCTGCAGGGCCCAGTGACTCATGTGTGACACAAGATGAGGAATCCTCATCTTGTGACATCATGGGTCCCCAGCCCAATGGCCACCACCCCCACGTCCcctccacagaggaggagagctCTAACGAGCCCCCTGTTGCAGCTCCAGCAGAACCTCCAGATGCCAGTAAAGCCCAAGAAGAGCCAACACCTAAGGAGGAGGAGCCCACAGCCAAAGAGGCAGAGCCTGAGAACACAGAGAAATACAATGAGCTGTTTTGGCTTGATGGCAGTACTCAGCCCATGGCTGACGGGGATGGCCAGGCCAGGCAGGCTGACTTCCAGCCTTTGATTGAAATGTCCGAGTCTTTAGATGCTGAGGTCCAGCCTAAGCACACAGAGGGTCTCCTAGTATCACAAGCGGACTGTGTGAATGGAAATGCGTCAATGGACAGCCTGGACTCGCAGAGCCTCAAAAGCAGCAGTGAGGCTGAGAAAAGGACTCCCCAGAGCCCGGCTGAAGGCTCTAATGAACCAGAACAGGAAGAgcacaaagacaaaaatgaGAGCAATCCAACTCAGGAGCCCCCTCCCCAGGATGGCAGGGCAACAACAGAACATGTTGAGGAAGATCAAGATACAGAAGGAGGTTCCACAGCCAAGACATGCAAGGTGAGCCTGTCAGAGCAGCTGAAGGGATCTGCTGAATGGACAGAGGAAGAGCCACAACCAGTCCCTCCCCATCCTCCCTTAGTGGTTGACCACCAGCGACTTTCGGCTCTCCTGGATATGGTGGTGAAGAAGAGTGAGGGCTACAGTGTGGAGCAGCTGGAGAGACTGTACTCCCTCCTCAGCCAGTGTATCTACCAGCACCGCAGAGAGTACGAAAAGACCCAGCTACTGGAGGAGATGGAGGAGCGAATCCAGCATTTCGATACATTCCTGTGAGAATACCTAATCAGGTAGATCCTGAACAGCCTGGgaccacaaagacacacaaactgagtgagagagagagagagagcgagagagagggaaggagctTCTGAGTCCAGCCCtcaccacaaaaacacacacacacaaaaaaaaaaatatccagcCCCCTTTTCTTGCTGAGAAGGGGACACAACGAGGACGACGTTGAGGACAGAGACATTCAATGGTGCTATCGTCTCAGGAACCTGGCCAGATCCAGACCCATTCTACACAACCAAACTCCTGGAGGTGTGTCAGTCACACACttacgcgcgcgcgcgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctaacggTGACGGGCAACCCTGGTGCTACTCGGGTGCTATCCTAACTTTTATCCACGCTGCTCTTGGGATTATTTCTTAACTTGGATGACTAGCAAAATCTAACAGATCGGGTGATGTCATATCGCAACCTGGCCGCTTCTCTCCGGAGCAGGCCGTGCATACACGCACCTTGACTCTTGGTTATGCATGTATTTCTACCAACCCACACCCagaaatatacacatacatacatacacacacacacacacacacacacacacccccagaTTCTTACCAGCAAAAGTGTGAATGCAGAGTGCCGCTAGGAGATGAGGACAGATGTTCTGAATCACTGAACCACATTGCTGAGCCCATCTTTCCCTCACGTTCGTCATAGGCCAGTTATTACCGTGCTATTATGCGGCTCATTTTATCTGCCACTTTAGCTCCATGCTTTTTATTCAATATCTGAGCCACCGTCAAGGATACTCACCCGGAACAATGGTTTACAACAAAGTTTTTAGCGTGAACACAAACTCGATGAGGTTAGCACAGCAGGACCAGAGCCCATGATGTCCTCTTCATTACAGCAGTCACCGGGTGTGGAGAGCTGTTAGCCCCCCCCTCAGCGGTTGTGTCCGAGTTACTGGTGAACGAGCGGCGCAGCGCGTGACTGTAGGTCAGTTGTACAACCACTACGCTCACAGACCACCTCTGGCGTTCAGTCTTAGCAGATTGTCACGTCCTAAATCGTTTGTGGTAGCTAACCCCTCCCCTCCTCACTACATTCACAGTCTGAATGTTTTCCCTCCCCACTCAAGCTGTGCTCGccagtagatttttttttttttctcctaaagACACCCCAGCGGAGGAACTGGAAGCAGTACAAATTTGAATGCGTGTAGAGTTTGCACTGCCTAGTGTGTGCCTTATTTCAAACCTCAAATGAAACGCTGATATATATATTCAGCaggattttttatttactaCTTGTGACAATGAACAGGCTCCAAGTTGGGGTGGGCCCTAACCACTGAGGTCACGGTTACCTTAaagcaaaatatatatacagtatatatatatatatgtgtatatatataaatttaatTTTAACCTTAGACATACCTAGGTTATCTCCAACCTGGGCCAAAAAAACTAATTGACGATAAAAGGTGTTCTATACAGATAATACTTACCCTGTGTGGCTGTGTCAGTGTTGTGGCCAGATGCATCTCAAGCACTCgaaatgttttgatttttaaatcTATCCATGCCCCGTTAAAACCCAGACCTGTTGGGGGAGGTCAGCCTCCACCTGAGCAGACAGCAGGTGTATGAAGAGGTTGACGACACCAgcttttcttcacttttcccATATATGCAAAACCAGAACATTATCATGCGAGTCAAACGATTTACCATGCCAAGTGTTATCCCACTCCCTAATAAAAAGGTGCTGACATGACGGTGCCCGTTCACAGGAATTCTGTTTCAGCTATGAAAATGTTCTATTAGACGGTCATAACAACCTATCTGTTATGTTGTGAATTTGCTAATTATTTTGTAcgggttgtttttttgttgttgttttttctttgtacacaaatgctttgctTGAGTTGATATTTTGCATGGGTTGTGAATCCATAATGAACAAGGCCATTCTAGGCAGTGCCCGTCACTAAGGTGTGTAAAGCATTACAtgatttctctttttcttttcttctcctcctttttttaaaattttttttataaatgagtGTATCGACTTTATGGATTTATTTCATCTGTTTTTCTCAACGCAAGACAAGAGAAGCTGGATTCTCATCTGAGGCCGACACAGTGAAGTTTTCTGACTGCAGTAAATAAAGGGGTTTACTGAAGCTTTATGACGTTTTCATGGCATTGTCATGGTTTTGGAGATGCCATATTTTGAGCTAGTTTGTACTGGATAAGgtgtctcctcctcccccttccCCCTTCACTCTTGTCCAATCCTCAACCAACCTCTTGGTGCAACTCTGACCCCAGCTCACCTCTGCCTTTTCTCAGATTCTCGGTGATAAAAGCAAAGACCATATGCAAACTGGCAACAACAGGTTAGCACTTGGACTACTGCAGAGAGAAAAACCAACGCTACCTCagcttaatttattttaatgcgAAAACTGTTTACTGGGTACAAAAacgctatttttttttcttttcttttttctcccccGAAATACTGTTGCAACATCTACAGTACCATCCGAGGTACCAGATCAGTGAAACCACAGCTGCCACAGTAATCCAAGAGTTGTTTATATCTCTCCGATTGTtctgtatgtttgtatttgaGCCAGATGATGATTGCATACGTTTTAAGCATATTTCATGGATTGTATATTTAATGCTTACGTTTCAGGTTCTTCTTAATTTCTACAGTACCTAGTTCTGCTCCTCTTTCATGTTATCACCCCCACACTTTCTTAGAAGCTACGGAGAGCATTTTCTGCCTATTTTACACAACCATCGccttcattattatttttttttgcagattttcATCTCATGATTcagattatttattattaaacatgttttacacCTAATTTTCAGTCAATTGTCTTTTTGTACGTTTTTGAAATTTAACAAATCGGGAAGCGTTGCACGTCCGTTTTAACAATTTAGCTGAATTGCGTAGCGTTTGTGtagcagttttatttttattttatttttttggcgtGTACGGGGGAATAAAGGGTTTACAGGTCTCTCAGGTTCAACACGCGACAACATGCCCTTTCaactttttctatttatttcaaTGTTCTGGTGTTTTCTGTGTTAAAGCGGTTACAGTTTGTGGCATACTGGAAGAGACTAACATAAGGACAGAACTGATATTTAAAAAGTAGTGTCTAGTACATCCCAGAAAGAGAAACAGGACCAGATGTTGTTCACTTTGTCTCCACTTTCTGCCAAAAgagttattttttatgaatttagaaacgcatatgaaaataaaatatgggTAGTTAAATGTCATACATTGTGATCTTCCTTTCTTATTATAAATTGTAGCCAGTTTGGACTAACAACCAATTTTTGTCTGGTAGTTGAGACTACTTAGTCCAGTATGCAGAGGGAAAGGGTTTGTTCTATCCTGAATTACTTTGTTCGTCCCCATTTCTTTCACACTTAATTTAGTCAAGAGTTTCCATAGCTTTGTcaattctgtttgtttgtgtatttaacACACCTGTTCGCAATGGTTACTTTAGTGTAAGTTATATTTGAAATGAAACCTTTACTGTATTTCTCAAACTGCTGTGATATACTTGAATAAAAAAGGTGCAAACTGTA

Function

GO: NA

KEGG:

id description
K22531 ATAD2; ATPase family AAA domain-containing protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU249294 lncRNA upstream 28511 13468423 ~ 13474133 (+) False LOC120546706
TU249296 lncRNA upstream 34557 13458602 ~ 13468087 (+) True G184085
TU249297 lncRNA upstream 41738 13458602 ~ 13460906 (+) False G184085
TU249284 lncRNA upstream 53545 13443043 ~ 13449099 (+) True G184078
TU249278 lncRNA upstream 68140 13434212 ~ 13434504 (+) True G184075
TU249355 lncRNA downstream 311885 13889301 ~ 13890916 (+) True G184128
XR_005637034.1 lncRNA downstream 374969 13952385 ~ 13988656 (+) True LOC120547176
XR_005637035.1 lncRNA downstream 379509 13956925 ~ 13988656 (+) False LOC120547176
TU249492 lncRNA downstream 792708 14370124 ~ 14370768 (+) True G184235
TU249501 lncRNA downstream 844911 14422327 ~ 14424853 (+) False LOC120546619
XM_039781816.1 mRNA upstream 28485 13468235 ~ 13474159 (+) False LOC120546706
XM_039781817.1 mRNA upstream 28485 13468805 ~ 13474159 (+) True LOC120546706
XM_039781818.1 mRNA upstream 29385 13468235 ~ 13473259 (+) False LOC120546706
XM_039780950.1 mRNA upstream 70873 13421308 ~ 13431771 (+) True opn8b
XM_039780978.1 mRNA upstream 89832 13388815 ~ 13412812 (+) True opn8a
XM_039781329.1 mRNA downstream 293471 13870887 ~ 13875635 (+) True gzf1
XM_039782333.1 mRNA downstream 356417 13933833 ~ 13938559 (+) True chgb
XM_039782503.1 mRNA downstream 412065 13989481 ~ 13990079 (+) True LOC120547093
XM_039781909.1 mRNA downstream 447068 14024484 ~ 14139891 (+) False LOC120546742
XM_039781907.1 mRNA downstream 447069 14024485 ~ 14140769 (+) True LOC120546742
TU249175 other upstream 255228 13206308 ~ 13247416 (+) False G183994
TU249176 other upstream 352566 13145475 ~ 13150078 (+) True G183994
TU249092 other upstream 494233 12990676 ~ 13008411 (+) True LOC120546167
XR_005637057.1 other upstream 2771862 10730505 ~ 10730782 (+) True LOC120547354
TU248549 other upstream 2836172 10622736 ~ 10666472 (+) True G183540
XR_005636930.1 other downstream 447068 14024484 ~ 14121514 (+) False LOC120546742
TU249487 other downstream 784925 14362341 ~ 14381187 (+) True G184231
TU249525 other downstream 947720 14525136 ~ 14529370 (+) True G184258
XR_005636833.1 other downstream 1712258 15289674 ~ 15293252 (+) False LOC120546207
TU249798 other downstream 1724509 15301925 ~ 15318836 (+) True G184458

Expression Profile