Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039781474.1 |
| length | 957 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | nme6 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 18194483 ~ 18198503 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006165 | nucleoside diphosphate phosphorylation | biological_process |
| GO:0006183 | GTP biosynthetic process | biological_process |
| GO:0006228 | UTP biosynthetic process | biological_process |
| GO:0006241 | CTP biosynthetic process | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004550 | nucleoside diphosphate kinase activity | molecular_function |
| id | description |
|---|---|
| K00940 | ndk, NME; nucleoside-diphosphate kinase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU251013 | lncRNA | upstream | 12500 | 18181132 ~ 18181983 (+) | True | G185323 |
| TU250953 | lncRNA | upstream | 29829 | 18155970 ~ 18164654 (+) | True | LOC120546825 |
| XR_005636952.1 | lncRNA | upstream | 36042 | 18156123 ~ 18158441 (+) | False | LOC120546825 |
| TU250952 | lncRNA | upstream | 36375 | 18155970 ~ 18158108 (+) | False | LOC120546825 |
| TU250941 | lncRNA | upstream | 54264 | 18138893 ~ 18140219 (+) | False | znf513a |
| TU251049 | lncRNA | downstream | 99360 | 18297863 ~ 18298151 (+) | True | G185353 |
| TU251050 | lncRNA | downstream | 100810 | 18299313 ~ 18300098 (+) | True | G185354 |
| TU251052 | lncRNA | downstream | 103677 | 18302180 ~ 18302519 (+) | True | G185356 |
| TU251053 | lncRNA | downstream | 104195 | 18302698 ~ 18302965 (+) | True | G185357 |
| TU251055 | lncRNA | downstream | 106751 | 18305254 ~ 18305577 (+) | True | G185359 |
| XM_039782044.1 | mRNA | upstream | 17379 | 18173169 ~ 18177104 (+) | True | atraid |
| XM_039782036.1 | mRNA | upstream | 54223 | 18127131 ~ 18140260 (+) | True | znf513a |
| XM_039782037.1 | mRNA | upstream | 54223 | 18127131 ~ 18140260 (+) | False | znf513a |
| XM_039782039.1 | mRNA | upstream | 54223 | 18130689 ~ 18140260 (+) | False | znf513a |
| XM_039782306.1 | mRNA | upstream | 145054 | 18020963 ~ 18049429 (+) | False | fndc4a |
| XM_039781472.1 | mRNA | downstream | 75326 | 18273829 ~ 18282702 (+) | True | si:ch211-142k18.1 |
| XM_039781473.1 | mRNA | downstream | 81763 | 18280266 ~ 18282702 (+) | False | si:ch211-142k18.1 |
| XM_039781471.1 | mRNA | downstream | 85397 | 18283900 ~ 18293835 (+) | True | chrna2b |
| XM_039782508.1 | mRNA | downstream | 148733 | 18347236 ~ 18358913 (+) | True | LOC120547097 |
| XM_039782805.1 | mRNA | downstream | 203569 | 18402072 ~ 18409077 (+) | False | zc3h14 |
| XR_005637008.1 | other | upstream | 139557 | 18020963 ~ 18054926 (+) | True | fndc4a |
| XR_005637007.1 | other | upstream | 142412 | 18020963 ~ 18052071 (+) | False | fndc4a |
| TU250889 | other | upstream | 277235 | 17916853 ~ 17917248 (+) | True | G185237 |
| TU250755 | other | upstream | 508085 | 17682558 ~ 17686398 (+) | True | G185145 |
| TU250758 | other | upstream | 521597 | 17669172 ~ 17672886 (+) | False | G185145 |
| unassigned_transcript_1081 | other | downstream | 733813 | 18932316 ~ 18932387 (+) | True | trnae-cuc_27 |
| TU251420 | other | downstream | 1005651 | 19204154 ~ 19208096 (+) | False | LOC120546624 |
| XR_005636888.1 | other | downstream | 1231092 | 19429595 ~ 19539308 (+) | False | nhsl1b |
| XR_005636889.1 | other | downstream | 1231092 | 19429595 ~ 19539208 (+) | False | nhsl1b |
| XR_005636890.1 | other | downstream | 1231093 | 19429596 ~ 19539208 (+) | False | nhsl1b |
