RNA id: XM_039784298.1


Basic Information

Item Value
RNA id XM_039784298.1
length 1757
RNA type mRNA
GC content 0.51
exon number 2
gene id adob
representative True

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 3173605 ~ 3176172 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGCGGACGTGTTTGACAGTTATTCACAAATGGGGCCCAGAAGTCGATGAGACTGACCGCTCGTGAGTCAGATGCTGTCTGAAAGTTACCCCCGCAGAGTTGTATCATCATATGTTCGTTGCGTTGATTTATACGTGCAAATTCACAAGTGTTTATTAGCACAGAAACAACACGAATGAATGAACACGTGAAGGGGCAGAAAGCAGACAGTTAAAGCGGGCAATGAACGTGGTGTTGTGAGCGGACCAAAGAGAAGATCAAAGAGgaaTACCAACAAAACAGTTTATACTACAACTGTCCAAAGGCCTGAAGAAGATTGTGTGTGCGGAGTGAGTCGGCCTGTTAACAGACGATCTTTGAGAGCTAGCTAACACAGCTACCGCTAACAAGCGGAGAGAGAAGACCGGGGGCTGCACCGCGGTCCGTTCCTCGCTCCGGTATGATGACAGGTGACAGCAACATGACCTCCATCGTTCAGAGAATAGCTCGGCAGGCTCTCCTCACCTTCAGGAGTCCGCCCCGGCTCGGCGAAGAGGCCGGTAAATCTTTCCTGGAGAACCGGAGCCAACTGAAGAGCCTAATGACGGAAGTGCGAGCGGCGGACCTGAAGCTCGTTCCTCGACGTGCCGACAACAACAACGTGAGCCCTTCGCTCCGCGGGCCTCCGGTCACCTACATGCACATTTGCGAGATGGACCAGTTCAGCATGGGGGTGTTTCTGCTGAAAAGCGGCGCCTCCATCCCGTTGCACGACCACCCGGGGATGCACGGCATGCTCAAAGTCCTGTACGGAAAGGTCCGGATCAGCTGCTTTGACCGGCTGGAGAGGCAGGGCTGCACGCCGGCAGCGCCTCCGCTTCCCCCGGCGCAGAAGGGCGCCCTGCGGCGCTCCCTGCTCCGCTCCACGGATGTCTACACGGAGGAGAGCGGCCCGTGCGTGCTCTCCCCGGACCGGGACAACCTGCACCAGATCGACGCCGTGGACGGCCCGACGGCGTTCATGGACATCCTGGCCCCGCCGTACGACCCGGACGACGACAGAGACTGCCACTACTACAAGGTGCTGACAGAAGCCGAGGTTAAAAACACAGAGCAGAAGGAGGTCTGGCTCCTGGAGATCTCGCAGCCTCCGGAGTTCTGGTGCGGAGGGGAGCCGTACCCGGGCCCGGAGGTCTGCCTCTGATGCCCTCTGACAGACTCTCCTTTCCTCCGGCTGCATGGGCTGGTTTATATTCACACGGCCTGTAGTGGCACAAGGCCGGGGCTTTTGGACATGGTTTGACAACACTAGGCTGAGTAAAGTAGGGCTGATTGATTATGGAAAatatcataatcacgattattttggatGATAATGAAATCaagattatttaacacgattactcattgacttttggaaagatgttgcaaatATTGAACCTAAAAAGTAGTTAAACAGTTgaacaaatcaacagtaaaaacaccttgaacagtgaaatttcccttttatACTTTACCCGTTTtgaaaaaattttaaattcagatcacaagacaaaataacagtttacttgcaaaacgtaatgtgcaaaataattgtttttctctgaTTTCTGTCTTTGGACAGTAGGAGCCGAAATCGTAATCGCGATtgaaatttcgattaattgcacagccctagaatAAAGGGTCTCTCTAAATCAGGTCTGCACGATGATGACAGATAATATGCGATTTGAAACTGATATTACTTGCAATAAATAAGCTATacaagatattaaa

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0047800 cysteamine dioxygenase activity molecular_function

KEGG:

id description
K10712 ADO; cysteamine dioxygenase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU260265 lncRNA upstream 26756 3142057 ~ 3146849 (+) True G191610
TU260277 lncRNA upstream 117369 3055902 ~ 3056236 (+) True G191617
TU260191 lncRNA upstream 155157 2999740 ~ 3018448 (+) False G191571
TU260177 lncRNA upstream 172970 2999740 ~ 3000635 (+) False G191571
TU260238 lncRNA downstream 19622 3195794 ~ 3258079 (+) False LOC120547552
TU260254 lncRNA downstream 35084 3211256 ~ 3258079 (+) False LOC120547552
TU260243 lncRNA downstream 35289 3211461 ~ 3258079 (+) True LOC120547552
TU260314 lncRNA downstream 132876 3309048 ~ 3314217 (+) True G191650
TU260255 lncRNA downstream 152424 3328596 ~ 3339074 (+) False LOC120547552
XM_039783787.1 mRNA upstream 35854 3123767 ~ 3137751 (+) True znf365
XM_039783786.1 mRNA upstream 35854 3123767 ~ 3137751 (+) False znf365
XM_039783788.1 mRNA upstream 35854 3123767 ~ 3137751 (+) False znf365
XM_039784697.1 mRNA upstream 62647 3093967 ~ 3110958 (+) True LOC120548437
XM_039784458.1 mRNA upstream 343857 2829059 ~ 2829748 (+) True LOC120548310
XM_039783652.1 mRNA downstream 39072 3215244 ~ 3250866 (+) True kif11
XM_039784698.1 mRNA downstream 79278 3255450 ~ 3256441 (+) True LOC120548438
XM_039783654.1 mRNA downstream 84550 3260722 ~ 3268081 (+) True LOC120547879
XM_039783653.1 mRNA downstream 87326 3263498 ~ 3268081 (+) True LOC120547878
XM_039784388.1 mRNA downstream 100472 3276644 ~ 3303286 (+) True slc22a15
unassigned_transcript_1109 other upstream 23061 3150473 ~ 3150544 (+) True trnah-gug_17
unassigned_transcript_1108 other upstream 23719 3149814 ~ 3149886 (+) True trnar-acg_20
TU260292 other upstream 78183 3093984 ~ 3095422 (+) False LOC120548437
TU260181 other upstream 251881 2823364 ~ 2921724 (+) False G191571
TU260196 other upstream 395238 2775308 ~ 2778367 (+) True G191573
TU260665 other downstream 1095801 4271973 ~ 4282720 (+) False arfgef3
TU260668 other downstream 1111725 4287897 ~ 4288644 (+) True G191903
TU260824 other downstream 1710204 4886376 ~ 4887023 (+) True G192040
TU260911 other downstream 2843950 6020122 ~ 6396899 (+) False si:dkey-22n8.3
TU260913 other downstream 2843950 6020122 ~ 6396805 (+) False si:dkey-22n8.3

Expression Profile