RNA id: XM_039791033.1


Basic Information

Item Value
RNA id XM_039791033.1
length 370
RNA type mRNA
GC content 0.55
exon number 2
gene id kiss2
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 27695624 ~ 27696717 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGAGACTTGTGGCTGTGGTTGTGGTGTGCGGGCTGATTGTTGGAGGGAGTGTGGGAGCAGCTCCGCCGGGATTCCACTCTGCACAGAGGACACATGCAACAGGATCAGTCCTCTCGGCACTCAGGAGAAGAGCTGCAGGAGACTTGTTGGCGGAGGACGCCAACCCGTGTTTCTCCCTGAGAGAGAATGAAGACCAGCGGCAGCTCCTGTGCAACGACCGCGGTAGTAAATTCAACTTCAACCCGTTCGGCCTCCGCTTCGGGAAACGCTACAATGGCTACGTTTACAGAAGAGCCGTTAAAACAGCCAGGACAAATAAAGTCTCACCCCTTTCTCTCTTCTCGTGAGAACTGGAGGTGCCTACTTGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU313030 lncRNA upstream 64581 27628951 ~ 27631043 (+) True G230858
TU313014 lncRNA upstream 84621 27610407 ~ 27611003 (+) True G230844
TU313013 lncRNA upstream 88065 27607011 ~ 27607559 (+) True G230843
TU312956 lncRNA upstream 155378 27501846 ~ 27540246 (+) True G230791
TU312954 lncRNA upstream 198023 27497235 ~ 27497601 (+) True G230790
XR_005638074.1 lncRNA downstream 2346 27699063 ~ 27701973 (+) False LOC120552997
TU313052 lncRNA downstream 2603 27699320 ~ 27702637 (+) True LOC120552997
TU313056 lncRNA downstream 62881 27759598 ~ 27760115 (+) True G230878
TU313057 lncRNA downstream 66159 27762876 ~ 27779078 (+) True G230879
TU313061 lncRNA downstream 82639 27779356 ~ 27800032 (+) False G230881
XM_039791032.1 mRNA upstream 44542 27648003 ~ 27651082 (+) True spx
XM_039791029.1 mRNA upstream 50745 27637088 ~ 27644879 (+) False golt1ba
XM_039791030.1 mRNA upstream 50745 27637139 ~ 27644879 (+) False golt1ba
XM_039791028.1 mRNA upstream 50745 27637176 ~ 27644879 (+) True golt1ba
XM_039791031.1 mRNA upstream 52788 27637176 ~ 27642836 (+) False golt1ba
XM_039791439.1 mRNA downstream 153020 27849737 ~ 27959398 (+) True LOC120553234
XM_039791441.1 mRNA downstream 169946 27866663 ~ 27959398 (+) False LOC120553234
XM_039791440.1 mRNA downstream 216995 27913712 ~ 27959398 (+) False LOC120553234
XM_039791037.1 mRNA downstream 320126 28016843 ~ 28023618 (+) True LOC120552999
XM_039792180.1 mRNA downstream 453015 28149732 ~ 28293546 (+) True LOC120553593
TU313012 other upstream 91922 27603005 ~ 27603702 (+) True G230842
XR_005638128.1 other upstream 623072 27069077 ~ 27072552 (+) False LOC120553194
TU312731 other upstream 1314515 26372736 ~ 26381109 (+) True mrps33
TU312732 other upstream 1314515 26372736 ~ 26381109 (+) False mrps33
TU312620 other upstream 1648943 26038287 ~ 26046681 (+) False arhgef39
TU313087 other downstream 244604 27941321 ~ 27947473 (+) True G230904
TU313169 other downstream 361014 28057731 ~ 28058218 (+) True G230975
unassigned_transcript_1530 other downstream 774089 28470806 ~ 28470878 (+) True trnat-ugu_41
unassigned_transcript_1531 other downstream 774389 28471106 ~ 28471178 (+) True trnak-uuu_24
XR_005638234.1 other downstream 804517 28501234 ~ 28501419 (+) True LOC120553833

Expression Profile