RNA id: TU57834


Basic Information

Item Value
RNA id TU57834
length 732
RNA type TUCP
GC content 0.62
exon number 1
gene id G43045
representative True

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 32460132 ~ 32460863 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCTGTGTCTCTGGGAGGTGCAGTCCTCTGCTCTTGGTGAACTCAGAGTACAGTGCTTCCAcgtttctcctcctccctctcctcctcctcagtgaGTCATCTCCCCTCAGGCTTCCGTTAACTATTTGGCCCGTAACAGGATGGATGAGCCCTGCCTGCAGTATCCCCGCCATGTCCATTCCCACAGAGCCTTGCAGCGGCGCGGTGATGGGGGGCGGCGGCGGAGGCGGCAGCTTGTGACAGCTGCCGGCGCCGTGGTGGCCGACTGCTTCTCCCGTCCCGGCGCCACTGGTGGTGCTTATTTCTCCGGACGCCTTGGTCAGATCTATGGCCGTTTCTTGCCAGCCGTTGATCAACATGGCAGCTCCCGTGCGGTGAGAGGGCGGCGCCACCACCGGAGTAGCGCCGCCGGAGCTCGTGGTGGCGGCGGCATGGCATGCCGATTTCCCGGCTAAAACCTTGGCGGCGGCTGCAGCGGCAGCGGCTTCGTAGTCAAATGACCGCCGACCCCCCGCTCGTTTGAGCTCGGGGAGGTACGGAGGAGCCACGAGCCTCTCCTGTAAGAGAGGCAAGGAGTTGAGGCGCCAAGCTCCGCGCCCACATGCGCCGCCCCGCGACATGTACTGCCAAAGTGGACAGAGTGGGTGAGGGGTAGACAAGAATGGGGAGAGAGACGATGGCTTTGTTAAACATACATATGGACTGAGACACGACACAGTGGTGGCTGTCAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57833 lncRNA upstream 257 32459664 ~ 32459875 (+) True G43044
TU57818 lncRNA upstream 106572 32353086 ~ 32353560 (+) True G43037
XR_005639070.1 lncRNA upstream 672260 31781477 ~ 31787872 (+) True LOC120558237
TU57753 lncRNA upstream 698701 31698778 ~ 31761431 (+) True G42989
TU57750 lncRNA upstream 823195 31635978 ~ 31636937 (+) True G42986
TU57835 lncRNA downstream 1176 32462039 ~ 32462312 (+) True G43046
TU57836 lncRNA downstream 3896 32464759 ~ 32466215 (+) True G43047
TU57840 lncRNA downstream 6643 32467506 ~ 32467810 (+) True G43048
TU57841 lncRNA downstream 7984 32468847 ~ 32469083 (+) True G43049
TU57886 lncRNA downstream 211374 32672237 ~ 32743785 (+) False G43089
XM_039796522.1 mRNA upstream 15808 32380682 ~ 32444324 (+) True rspo4
XM_039797122.1 mRNA upstream 1042640 31377980 ~ 31417492 (+) True zgc:171566
XM_039798972.1 mRNA upstream 1586626 30821681 ~ 30873506 (+) True LOC120558103
XM_039798881.1 mRNA upstream 1774597 30679316 ~ 30685535 (+) True lsm3
XM_039799187.1 mRNA upstream 1946644 30504694 ~ 30513488 (+) True abraa
XM_039797652.1 mRNA downstream 186736 32647599 ~ 32730753 (+) True ripor3
XM_039797650.1 mRNA downstream 186736 32647599 ~ 32730753 (+) False ripor3
XM_039797654.1 mRNA downstream 186736 32647599 ~ 32730753 (+) False ripor3
XM_039797651.1 mRNA downstream 206648 32667511 ~ 32730753 (+) False ripor3
XM_039798905.1 mRNA downstream 359107 32819970 ~ 32834491 (+) True psmf1
TU57106 other upstream 3217879 29240413 ~ 29242253 (+) True G42449
XR_005639013.1 other upstream 5761561 26653260 ~ 26698571 (+) False anks1ab
TU56292 other upstream 5911333 26542507 ~ 26548799 (+) False G41850
TU56293 other upstream 5911333 26542507 ~ 26548799 (+) False G41850
TU56251 other upstream 6186817 26268602 ~ 26273315 (+) True G41825
TU57843 other downstream 9932 32470795 ~ 32471605 (+) True G43051
TU58042 other downstream 577071 33037934 ~ 33041264 (+) False LOC120556790
TU58122 other downstream 726875 33187738 ~ 33212318 (+) True G43277
XR_005639022.1 other downstream 801332 33262195 ~ 33336767 (+) True angpt4
TU58196 other downstream 879465 33340328 ~ 33345806 (+) False LOC120557806

Expression Profile