RNA id: TU63236



Basic Information


Item Value
RNA id TU63236
length 215
lncRNA type inter_gene
GC content 0.56
exon number 3
gene id G47304
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4887949 ~ 4889652 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agaggacagagaccaggacagagaccagaggacagagaccagagaccagacagacagagaccaggacagagaccagaggacagagaccagacagacagacagagaccagaagacagagaccagaggacagagaccagaggacagaggacagaggacagagaccagaggacagagaccagacagacagacagagaccaggacagagaccagaggac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63229 lncRNA downstream 35535 4852190 ~ 4852414 (-) True G47297
TU63178 lncRNA downstream 159840 4727833 ~ 4728109 (-) True G47251
XR_005639215.1 lncRNA downstream 177542 4709392 ~ 4710407 (-) True LOC120559128
XR_005639360.1 lncRNA downstream 247807 4639093 ~ 4640142 (-) True LOC120559758
XR_005639340.1 lncRNA downstream 252509 4634314 ~ 4635440 (-) True LOC120559646
TU63239 lncRNA upstream 175 4889827 ~ 4895639 (-) True G47305
TU63246 lncRNA upstream 14360 4904012 ~ 4911010 (-) False G47309
TU63248 lncRNA upstream 14497 4904149 ~ 4942146 (-) True G47309
TU63249 lncRNA upstream 14497 4904149 ~ 4909840 (-) False G47309
TU63251 lncRNA upstream 14497 4904149 ~ 4908653 (-) False G47309
XM_039800604.1 mRNA downstream 182409 4677700 ~ 4705540 (-) True efhd2
XM_039799718.1 mRNA downstream 266113 4591447 ~ 4621836 (-) False dedd
XM_039799717.1 mRNA downstream 266117 4591447 ~ 4621832 (-) True dedd
XM_039800536.1 mRNA downstream 507066 4283188 ~ 4380883 (-) False LOC120559100
XM_039799517.1 mRNA upstream 317570 5207222 ~ 5218713 (-) True LOC120558499
XM_039801403.1 mRNA upstream 848669 5738321 ~ 5741953 (-) False LOC120559579
XM_039801402.1 mRNA upstream 848669 5738321 ~ 5741953 (-) True LOC120559579
XM_039801854.1 mRNA upstream 1516711 6406363 ~ 6427923 (-) True tcea2
XM_039800050.1 mRNA upstream 1927055 6816707 ~ 6823536 (-) True LOC120558793
TU63181 other downstream 154664 4732796 ~ 4733285 (-) True G47254
TU63179 other downstream 156808 4730501 ~ 4731141 (-) True G47252
TU62956 other downstream 931567 3955604 ~ 3956382 (-) True G47059
TU62955 other downstream 932420 3955026 ~ 3955529 (-) True G47058
TU62665 other downstream 1602026 3283041 ~ 3285923 (-) True G46817
TU63619 other upstream 1806793 6696445 ~ 6721729 (-) True G47624
TU63635 other upstream 1914489 6804141 ~ 6805706 (-) True G47638
TU63670 other upstream 2065552 6955204 ~ 7036375 (-) True LOC120558602
TU63848 other upstream 2595775 7485427 ~ 7487060 (-) False G47814
TU63850 other upstream 2595775 7485427 ~ 7498802 (-) True G47814

Expression Profile