RNA id: TU63455



Basic Information


Item Value
RNA id TU63455
length 233
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G47498
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6571892 ~ 6572124 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctcctcctcaatagcttcagacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcaggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63441 lncRNA downstream 198349 6366360 ~ 6373543 (-) True G47485
TU63409 lncRNA downstream 335054 6232908 ~ 6236838 (-) True G47459
TU63397 lncRNA downstream 430003 6118484 ~ 6141889 (-) True G47447
TU63387 lncRNA downstream 535394 6036255 ~ 6036498 (-) True G47439
TU63380 lncRNA downstream 589036 5982391 ~ 5982856 (-) True G47432
TU63642 lncRNA upstream 254129 6826253 ~ 6827520 (-) True G47641
TU63669 lncRNA upstream 383080 6955204 ~ 6962388 (-) False LOC120558602
TU63671 lncRNA upstream 390364 6962488 ~ 6967475 (-) False LOC120558602
TU63672 lncRNA upstream 390364 6962488 ~ 6967475 (-) False LOC120558602
TU63685 lncRNA upstream 477624 7049748 ~ 7270452 (-) False LOC120558809
XM_039801854.1 mRNA downstream 143969 6406363 ~ 6427923 (-) True tcea2
XM_039801403.1 mRNA downstream 829939 5738321 ~ 5741953 (-) False LOC120559579
XM_039801402.1 mRNA downstream 829939 5738321 ~ 5741953 (-) True LOC120559579
XM_039799517.1 mRNA downstream 1353179 5207222 ~ 5218713 (-) True LOC120558499
XM_039800604.1 mRNA downstream 1866352 4677700 ~ 4705540 (-) True efhd2
XM_039800050.1 mRNA upstream 244583 6816707 ~ 6823536 (-) True LOC120558793
XM_039800051.1 mRNA upstream 244583 6816707 ~ 6823534 (-) False LOC120558793
XM_039800052.1 mRNA upstream 244583 6816707 ~ 6823530 (-) False LOC120558793
XM_039799655.1 mRNA upstream 255561 6827685 ~ 6838050 (-) True LOC120558600
XM_039799656.1 mRNA upstream 273911 6846035 ~ 6848369 (-) True LOC120558601
TU63181 other downstream 1838607 4732796 ~ 4733285 (-) True G47254
TU63179 other downstream 1840751 4730501 ~ 4731141 (-) True G47252
TU62956 other downstream 2615510 3955604 ~ 3956382 (-) True G47059
TU62955 other downstream 2616363 3955026 ~ 3955529 (-) True G47058
TU62665 other downstream 3285969 3283041 ~ 3285923 (-) True G46817
TU63619 other upstream 124321 6696445 ~ 6721729 (-) True G47624
TU63635 other upstream 232017 6804141 ~ 6805706 (-) True G47638
TU63670 other upstream 383080 6955204 ~ 7036375 (-) True LOC120558602
TU63848 other upstream 913303 7485427 ~ 7487060 (-) False G47814
TU63850 other upstream 913303 7485427 ~ 7498802 (-) True G47814

Expression Profile