RNA id: TU63853



Basic Information


Item Value
RNA id TU63853
length 264
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G47817
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7500657 ~ 7500920 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtatagtcaagtgttttatggatattcataacattgcttctatgtaatgtgttgtaggctatataggctacctggtcatattgctgttggttatgtttaacgtgattattacgtgcgaatagtataacaagagtatatgattattataaatatatgtactgtacgctaataataattgtgccctcccatgtatttcatatgccccccttaagactgaggtctgGCGACGGGTCTGAGCCTACATGTTACCAGCCACTAACTCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU63774 lncRNA downstream 58464 7441921 ~ 7442193 (-) True G47759
TU63773 lncRNA downstream 61793 7438503 ~ 7438864 (-) True G47758
TU63772 lncRNA downstream 62839 7437500 ~ 7437818 (-) True G47757
TU63771 lncRNA downstream 72732 7427534 ~ 7427925 (-) True G47756
TU63770 lncRNA downstream 73143 7424061 ~ 7427514 (-) True G47755
XR_005639162.1 lncRNA upstream 6376 7507296 ~ 7508404 (-) True LOC120558662
TU63857 lncRNA upstream 6401 7507321 ~ 7508425 (-) False LOC120558662
TU63883 lncRNA upstream 103047 7603967 ~ 7605303 (-) True G47846
TU63874 lncRNA upstream 106971 7607891 ~ 7623479 (-) True G47837
TU64039 lncRNA upstream 432029 7932949 ~ 7955256 (-) True G47949
XM_039800067.1 mRNA downstream 52808 7439183 ~ 7447849 (-) True LOC120558801
XM_039799689.1 mRNA downstream 92979 7375726 ~ 7407678 (-) True LOC120558624
XM_039800065.1 mRNA downstream 141249 7320025 ~ 7359408 (-) True LOC120558800
XM_039800064.1 mRNA downstream 175193 7320025 ~ 7325464 (-) False LOC120558800
XM_039799688.1 mRNA downstream 201231 7296566 ~ 7299426 (-) True LOC120558623
XM_039799769.1 mRNA upstream 89981 7590901 ~ 7599774 (-) True hsd17b10
XM_039799771.1 mRNA upstream 111567 7612487 ~ 7632545 (-) False fam120c
XM_039799770.1 mRNA upstream 111567 7612487 ~ 7632545 (-) True fam120c
XM_039799778.1 mRNA upstream 173542 7674462 ~ 7707260 (-) True LOC120558669
XM_039800375.1 mRNA upstream 276867 7777787 ~ 7844399 (-) False spryd3
TU63850 other downstream 1855 7485427 ~ 7498802 (-) True G47814
TU63848 other downstream 13597 7485427 ~ 7487060 (-) False G47814
TU63670 other downstream 464282 6955204 ~ 7036375 (-) True LOC120558602
TU63635 other downstream 694951 6804141 ~ 6805706 (-) True G47638
TU63619 other downstream 778928 6696445 ~ 6721729 (-) True G47624
TU64005 other upstream 271016 7771936 ~ 8187551 (-) True G47934
TU64023 other upstream 314231 7815151 ~ 7886850 (-) True G47937
XR_005639386.1 other upstream 605141 8106061 ~ 8106195 (-) True LOC120559931
TU64676 other upstream 2189610 9690530 ~ 9698107 (-) False olfml3a
TU64679 other upstream 2207411 9708331 ~ 9724134 (-) False olfml3a

Expression Profile