RNA id: TU64064



Basic Information


Item Value
RNA id TU64064
length 204
lncRNA type sense_over
GC content 0.46
exon number 2
gene id G47971
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8047299 ~ 8074235 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtctctctctctctctctctctctctctctctctctctctctctctctctcggtctctctctctctctctctctctctctctctctctctggtataTACAGGAACCCTGAAGTTGGTACTTTTTGAACACCTTTTTAAGACCCTTTCCTTACATTTAACACCTCAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64046 lncRNA downstream 52567 7991869 ~ 7994732 (-) True G47956
TU64039 lncRNA downstream 92043 7932949 ~ 7955256 (-) True G47949
TU63874 lncRNA downstream 423820 7607891 ~ 7623479 (-) True G47837
TU63883 lncRNA downstream 441996 7603967 ~ 7605303 (-) True G47846
TU63857 lncRNA downstream 538874 7507321 ~ 7508425 (-) False LOC120558662
TU64020 lncRNA upstream 104420 8178655 ~ 8179100 (-) True G47935
XR_005639295.1 lncRNA upstream 207712 8281947 ~ 8296462 (-) False LOC120559498
XR_005639298.1 lncRNA upstream 207712 8281947 ~ 8296462 (-) False LOC120559498
XR_005639297.1 lncRNA upstream 207712 8281947 ~ 8296462 (-) False LOC120559498
XR_005639296.1 lncRNA upstream 207712 8281947 ~ 8296462 (-) False LOC120559498
XM_039800388.1 mRNA downstream 104218 7900773 ~ 7943081 (-) False agap2
XM_039800386.1 mRNA downstream 104218 7900773 ~ 7943081 (-) False agap2
XM_039800385.1 mRNA downstream 110112 7900773 ~ 7937187 (-) False agap2
XM_039800384.1 mRNA downstream 110112 7900773 ~ 7937187 (-) False agap2
XM_039800383.1 mRNA downstream 110112 7900773 ~ 7937187 (-) True agap2
XM_039800401.1 mRNA upstream 26704 8100939 ~ 8112235 (-) False kansl2
XM_039800403.1 mRNA upstream 26704 8100939 ~ 8112235 (-) True kansl2
XM_039800402.1 mRNA upstream 26704 8100939 ~ 8112057 (-) False kansl2
XM_039800404.1 mRNA upstream 29881 8104116 ~ 8112235 (-) False kansl2
XM_039800405.1 mRNA upstream 39890 8114125 ~ 8120699 (-) True ccnt1
TU64023 other downstream 160449 7815151 ~ 7886850 (-) True G47937
TU63850 other downstream 548497 7485427 ~ 7498802 (-) True G47814
TU63848 other downstream 560239 7485427 ~ 7487060 (-) False G47814
TU63670 other downstream 1010924 6955204 ~ 7036375 (-) True LOC120558602
TU63635 other downstream 1241593 6804141 ~ 6805706 (-) True G47638
XR_005639386.1 other upstream 31826 8106061 ~ 8106195 (-) True LOC120559931
TU64676 other upstream 1616295 9690530 ~ 9698107 (-) False olfml3a
TU64679 other upstream 1634096 9708331 ~ 9724134 (-) False olfml3a
TU64778 other upstream 1950759 10024994 ~ 10025825 (-) True G48523
TU65038 other upstream 2568484 10642719 ~ 10654818 (-) True G48697

Expression Profile