RNA id: XM_039800367.1


Basic Information

Item Value
RNA id XM_039800367.1
length 1956
RNA type mRNA
GC content 0.45
exon number 8
gene id c1qtnf12
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9727874 ~ 9753686 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGcaaaaatagttagctaaaactatTGAATACAtgtttgaaatagttagctaaagtAATAAATAGTGAAACACTGACTAGAGACAAACTGAGgtgcacaaaaaaaatacatgagcTATAAAGGCAAACATGCAATAGTCTTATTGTTTGGAGGAAGTCctaaacctttttttattgttttattctaACACATGCAATCTGAATTTCTCTCCTTTATTTTAAAGGCCAACTTTCCGTTTTTGTTCTGCTTCCCTGTGGTGAGCTTGACGCTGTTGGCTGCTGCTACCTGCTGCGTTATCAGACAGACTGCCAGCGGATGCAGGAACTAGGATGGAGCCATACTGGAAAGATTTCTGACAACCAGCGAGTGGATCCACTAGGATCATGGATGGACTTTGTCAAAAGACCGGTTGGCAACTTCCCTGGAAAGTGTCGCAAACGCAAACGACCCCTGCCGGGCCCACCCGGTCCTCCTGGCCCTCCTGGCCCACAGGGACCTCCTGGCTCTCCTGGAGCCGAAGTGACCCAGGAAGTTCTTCTCCAGGAGTTCAAAGACATGATTAAAGAGGCTACAGAGAGGAGAGCAGCAGCGTTGGACAGACAAACCAGCCCCAGCCAGCTCCCTACGGCTCTCCTCACCCTGGAGGGGATGACCTCTTACCGGCGGATAGAAGAGGCTTTCCACTGCAAGCTCAAGGGCCCTGTGGTGGTCGACAAGAAGACTCTGGTGGAGCTCCAGAACTTTCAGacaCCACCAGCTAAAGGAGCCTTCCTCAGAGGGTCAGGAATGGACCAGTCCACCGGAAGATTCACAGCTCCCATCACTGGGATCTACCAGTTCTCTGCTAATGTCCACATTGACCACAATGAGGTGAAGAGGAGCAAGAGTCAGCTAAAGGCCAGGGATAATGTCCGGGTACTGATCTGCATTGAATCACTCTGCCACAGATACACCTCACTGGAGATGATTGTTGGATTAGAAAGTAACAGCAAGATATTCACTGTCAGCGTGCAGGGGCTGCTGGAGCTGCAGGCCGGGCAGTACACCTCCATATTTGTGGATAACGCAGCAGGCGCCTCCATCACAGTACAAAACGGTTCCGATTTTATGGGCATGCTGCTCGGTGTATAGTCTTACAACAGGAACCGGGCGTCATCCAAGCCATCCACTGCTGCCATTTtcgtcttgtgtgtgttttttttttttttttttttgcaatggaCTGCTTATGAGCACCATCACACAGTACCAAACCACAGGGGAGGTTTGAAGGAAGGAAGTGAGGCTGACATGGACTTGACTGCTTGTCAGATGGTGAAAGGACAGTGTAAAGAAGTCAAGGACTGAGTTTGTTTTTCACAGTGCACTGCTGCCACTTCCCTGAGGAACTTGGGATGCCTGTTGCTTCACCAATAAAATAACCAGAAAATTAAAGCAGTGAGTATGTTAACTGTTACAGTTTAtggttttttttctattctttcGTGGCTGTTGAAGACCTTTACAGAAAACCAAATatcaatgtttttaatgttctcTGGATAGATGTTGAAGAGCTAGGGAACACGAGAAAGTACTATTTgtagtatttgtgtttttaatgtatactgaaatgtttttttgtctacATGATCTATTATGTACACAAACTATAGTTATTTTTTATCATGGATTAAATCTCACATTTATATTTGTTATATGGTACATAGACTGAGTACACTGGACAATGGAAACATGCTCAATAGACAGAATACGGCCTCACAAGATCTTGTCCCACATATGTAATAACTTGTTTTGTAACTGCATTTTAAGCCACGTAGCAGCGTGGCAATGTTGGTCGTTCGTTCCACCATTTTGGTTCAGTCCAAAATATCTCCACAACTatttgatggattgccatgacattttgcaCATACATTTATGGTCCCAAGAGAATAAATCCTACTGGCTACGGTG

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K21410 C1QTNF12, FAM132A; adipolin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64673 lncRNA downstream 192 9727874 ~ 9729476 (-) False c1qtnf12
TU64674 lncRNA downstream 192 9728225 ~ 9729476 (-) False c1qtnf12
TU64661 lncRNA downstream 164454 9564964 ~ 9565214 (-) True G48430
TU64642 lncRNA downstream 235796 9427206 ~ 9493872 (-) False plekhg5b
TU64646 lncRNA downstream 342753 9379000 ~ 9386915 (-) True LOC120558858
TU64671 lncRNA upstream 7204 9760890 ~ 9762449 (-) True G48436
XR_005639087.1 lncRNA upstream 10382 9764068 ~ 9766189 (-) True LOC120558310
TU64692 lncRNA upstream 30028 9783714 ~ 9785241 (-) False hipk1a
TU64729 lncRNA upstream 139282 9892968 ~ 9893826 (-) True G48479
TU64726 lncRNA upstream 162892 9916578 ~ 9918879 (-) True G48477
XM_039799985.1 mRNA downstream 5652 9689729 ~ 9724016 (-) False olfml3a
XM_039799987.1 mRNA downstream 6771 9689729 ~ 9722897 (-) False olfml3a
XM_039799986.1 mRNA downstream 7856 9689729 ~ 9721812 (-) False olfml3a
XM_039799984.1 mRNA downstream 31347 9689729 ~ 9698321 (-) True olfml3a
XM_039799988.1 mRNA downstream 34252 9689729 ~ 9695416 (-) False olfml3a
XM_039799740.1 mRNA upstream 12625 9766311 ~ 9783853 (-) True hipk1a
XM_039799744.1 mRNA upstream 33679 9787365 ~ 9881696 (-) False LOC120558654
XM_039799742.1 mRNA upstream 33679 9787365 ~ 9881696 (-) False LOC120558654
XM_039799743.1 mRNA upstream 33679 9787365 ~ 9881696 (-) False LOC120558654
XM_039799741.1 mRNA upstream 33679 9787365 ~ 9881696 (-) True LOC120558654
TU64679 other downstream 5534 9708331 ~ 9724134 (-) False olfml3a
TU64676 other downstream 31561 9690530 ~ 9698107 (-) False olfml3a
TU64005 other downstream 1542117 7771936 ~ 8187551 (-) True G47934
XR_005639386.1 other downstream 1623473 8106061 ~ 8106195 (-) True LOC120559931
TU64023 other downstream 1842818 7815151 ~ 7886850 (-) True G47937
TU64778 other upstream 271308 10024994 ~ 10025825 (-) True G48523
TU65038 other upstream 889033 10642719 ~ 10654818 (-) True G48697
TU65448 other upstream 2135255 11888941 ~ 11891046 (-) False srxn1
TU65528 other upstream 2373200 12126886 ~ 12128425 (-) False G49083
TU65529 other upstream 2373200 12126886 ~ 12128425 (-) True G49083

Expression Profile