RNA id: TU64679


Basic Information

Item Value
RNA id TU64679
length 810
RNA type TUCP
GC content 0.47
exon number 3
gene id olfml3a
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9689729 ~ 9724134 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaacaaacgaacaggataaatggagatagattctacccgacctaaaaaaacagttgcgtgaccagagacgtaacaaccccctggtaaatattggagatgtatttgaaagatggagacagcttagatcccaaaaggacgcagaattggcttatttcctcctgaacagATGCCAGCATTCAGACAAGACAGTGGGCTCTCCCCACTCCAAACAATCACCATTAGGTAGGCCATGACAGAGCTTTTCCACACCGTGCGACGGACTGAACCAGCTGCTGACAAGCCTATCTCTGCCGAGCCTTGCTCCAGTCTGCTGGGATGCTCTGATGGGGACACTGGTTTTCACATAAGCGGTCAAGCTCCCAATGAAGCGCCCACCATGGATAAATGCTGCTTTTGTCGAGAGATTTTTACCCCTCTGAGCAGCTGTCCACAGCCCCTCAGGCACTTCTCCTGCTCAGAAACCCAGGCAAGTGCATGTCGGCTGTCAGGGCAGAGCCAGAAATGAACATTCAAGTTGAGAGACAGTTTTCATTATAGCGCACGGACCAATTTTAGATATCATGATGAAAAAATATTTCTCTCAAGAACCCCCTGtatgcaacaaattaaaacaagacaCACCTGTGTACTGTGCGTACTTGATGTGTGTACATAATGCATACCTCATTTGAAATCCGGCTCGGATACACCTCACACCTCAAACCATTTCACAATTCCTGGTAGTTGCATGACTCACCGATGCTCCGTGGATGTTCCCAAAAGTTGGTTTGTATTCACAGTAAGCCGTTAACTTTCCAAGATTATGTggcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64661 lncRNA downstream 143117 9564964 ~ 9565214 (-) True G48430
TU64642 lncRNA downstream 214459 9427206 ~ 9493872 (-) False plekhg5b
TU64646 lncRNA downstream 321416 9379000 ~ 9386915 (-) True LOC120558858
TU64652 lncRNA downstream 323110 9379000 ~ 9385221 (-) False LOC120558858
TU64502 lncRNA downstream 423079 9284917 ~ 9285252 (-) True G48311
TU64673 lncRNA upstream 3740 9727874 ~ 9729476 (-) False c1qtnf12
TU64672 lncRNA upstream 4091 9728225 ~ 9730079 (-) False c1qtnf12
TU64674 lncRNA upstream 4091 9728225 ~ 9729476 (-) False c1qtnf12
TU64671 lncRNA upstream 36756 9760890 ~ 9762449 (-) True G48436
XR_005639087.1 lncRNA upstream 39934 9764068 ~ 9766189 (-) True LOC120558310
XM_039799984.1 mRNA downstream 10010 9689729 ~ 9698321 (-) True olfml3a
XM_039799988.1 mRNA downstream 12915 9689729 ~ 9695416 (-) False olfml3a
XM_039799982.1 mRNA downstream 22697 9548670 ~ 9685634 (-) True klhl21
XM_039799981.1 mRNA downstream 138749 9548670 ~ 9569582 (-) False klhl21
XM_039799980.1 mRNA downstream 151908 9548670 ~ 9556423 (-) False klhl21
XM_039800367.1 mRNA upstream 5534 9729668 ~ 9753686 (-) True c1qtnf12
XM_039800366.1 mRNA upstream 5534 9729668 ~ 9751657 (-) False c1qtnf12
XM_039799740.1 mRNA upstream 42177 9766311 ~ 9783853 (-) True hipk1a
XM_039799744.1 mRNA upstream 63231 9787365 ~ 9881696 (-) False LOC120558654
XM_039799742.1 mRNA upstream 63231 9787365 ~ 9881696 (-) False LOC120558654
TU64676 other downstream 10224 9690530 ~ 9698107 (-) False olfml3a
TU64005 other downstream 1520780 7771936 ~ 8187551 (-) True G47934
XR_005639386.1 other downstream 1602136 8106061 ~ 8106195 (-) True LOC120559931
TU64023 other downstream 1821481 7815151 ~ 7886850 (-) True G47937
TU63850 other downstream 2209529 7485427 ~ 7498802 (-) True G47814
TU64778 other upstream 300860 10024994 ~ 10025825 (-) True G48523
TU65038 other upstream 918585 10642719 ~ 10654818 (-) True G48697
TU65448 other upstream 2164807 11888941 ~ 11891046 (-) False srxn1
TU65528 other upstream 2402752 12126886 ~ 12128425 (-) False G49083
TU65529 other upstream 2402752 12126886 ~ 12128425 (-) True G49083

Expression Profile