RNA id: XM_039799986.1


Basic Information

Item Value
RNA id XM_039799986.1
length 1494
RNA type mRNA
GC content 0.54
exon number 4
gene id olfml3a
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9689729 ~ 9724134 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

caattactccacctccaacctgaagaagcatcttaaaATGCCAGCATTCAGACAAGACAGTGGGCTCTCCCCACTCCAAACAATCACCATTAGGTAGGCCATGACAGAGCTTTTCCACACCGTGCGACGGACTGAACCAGCTGCTGACAAGCCTATCTCTGCCGAGCCTTGCTCCAGTCTGCTGGGATGCTCTGATGGGGACACTGGTTTTCACATAAGGACCGCATGCAGTTGTGGCATGAACAATCCCATCGCTATCACACAGAGATGCTGGATTTCAAAAAGCTAACTGCCGAGGCCATGGATGGGCTAAGGAATGAGCACAGCGTGCTGTTCAAAGACCTGGAAGGAGCTGCAGTCCGAGTGGATCGGATGGAGCGAGAGATGGACTACGTGGAAGCTCAGACTTCCCCTCGGGCCTGTGCGAATAAGGCAGACAAGGTGGTGGAGCAGGGAACCTGGGGGctggagagcagaggagaggaagagcaggaagaAGACTGGGAGGAGTTGCACTCCAGAGTCTCTGACTGTGTGGAAATCATCTCTGGCATCAGATCAGTCAAGATCCTGAAGAGAGTGGGCAGTCCCAAGGGCATGTGGACCAGAGACCCCAGGTCGTCCAAGGTTTACGTCTTTAACGAGACATCCGGAGACAGCCTCTACCAGTTCAACTCTGTACGAGACTTTTCCCGCTCTCCTGGCGTCACCGGCAGCCGACAGATCCGGCTTCCGTCTGAGTGGAGCGGCCCCGGCAGCGCTGTCTATAACGGCTATTTATACTACATACAGCAGGCGGCCGATATGGACATTGAGGTGGTTAAATATGACCTGCTGAGTGGCTCGGTGACAGACGTCACTATGTTCCCCGTGGAGAGCCACGCTACAGTTTACAGCCTCAACCCGGAAACCGTTGCGGACCTCGCAGCAGACGACGAAGGCCTCTGGCTCCTGTACGCCAACAGCGACAGTGAGCCCAACATCAACCTTGCAAAGATGGACCCGGCCACGCTCGATATAGAACAAATCTGGGACACCCGGTGCCCACGGGAGAACGCCGAGGCGGCTTTCGTAGTCTGCGGGACCGTCTACGTCGTGTACAACACGCGCCTGGCCAGCCGATCCCGGGTCCAGTGCCTGTTTGACGTCAACGACATGGTGATCAGCCAGGAGGCTCCCCTGATCTACTTTCCCAGGAGGTACGGAGCCCACGCCAGTCTGAAATACAACCCCGAGGAAAAACAGCTCTACGGCTGGGATGACGGCTACCAAATCATCTACAGACTGACCATGAAGAGGAAACTGCTGGTGTGACGGCAGGGACGTTGTGTCATGTTGTCAAAAGGCAATGCTAAAGAACAGAAGCAGTACATTTACACATGCTATGCCAAAAGTCTTCCAGCCGCCTGCAGACTCTTCATTCACCTTAGATTGAATACAGATCACCCATAACATTACACATTTTTAAGCAAATGAATCCGCCTttgaactttt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64661 lncRNA downstream 124515 9564964 ~ 9565214 (-) True G48430
TU64642 lncRNA downstream 195857 9427206 ~ 9493872 (-) False plekhg5b
TU64646 lncRNA downstream 302814 9379000 ~ 9386915 (-) True LOC120558858
TU64652 lncRNA downstream 304508 9379000 ~ 9385221 (-) False LOC120558858
TU64502 lncRNA downstream 404477 9284917 ~ 9285252 (-) True G48311
TU64673 lncRNA upstream 6062 9727874 ~ 9729476 (-) False c1qtnf12
TU64672 lncRNA upstream 6413 9728225 ~ 9730079 (-) False c1qtnf12
TU64674 lncRNA upstream 6413 9728225 ~ 9729476 (-) False c1qtnf12
TU64671 lncRNA upstream 39078 9760890 ~ 9762449 (-) True G48436
XR_005639087.1 lncRNA upstream 42256 9764068 ~ 9766189 (-) True LOC120558310
XM_039799982.1 mRNA downstream 4095 9548670 ~ 9685634 (-) True klhl21
XM_039799981.1 mRNA downstream 120147 9548670 ~ 9569582 (-) False klhl21
XM_039799980.1 mRNA downstream 133306 9548670 ~ 9556423 (-) False klhl21
XM_039799978.1 mRNA downstream 154046 9522095 ~ 9535683 (-) False nol9
XM_039799977.1 mRNA downstream 154297 9522095 ~ 9535432 (-) True nol9
XM_039800367.1 mRNA upstream 7856 9729668 ~ 9753686 (-) True c1qtnf12
XM_039800366.1 mRNA upstream 7856 9729668 ~ 9751657 (-) False c1qtnf12
XM_039799740.1 mRNA upstream 44499 9766311 ~ 9783853 (-) True hipk1a
XM_039799744.1 mRNA upstream 65553 9787365 ~ 9881696 (-) False LOC120558654
XM_039799742.1 mRNA upstream 65553 9787365 ~ 9881696 (-) False LOC120558654
TU64005 other downstream 1502178 7771936 ~ 8187551 (-) True G47934
XR_005639386.1 other downstream 1583534 8106061 ~ 8106195 (-) True LOC120559931
TU64023 other downstream 1802879 7815151 ~ 7886850 (-) True G47937
TU63850 other downstream 2190927 7485427 ~ 7498802 (-) True G47814
TU63848 other downstream 2202669 7485427 ~ 7487060 (-) False G47814
TU64778 other upstream 303182 10024994 ~ 10025825 (-) True G48523
TU65038 other upstream 920907 10642719 ~ 10654818 (-) True G48697
TU65448 other upstream 2167129 11888941 ~ 11891046 (-) False srxn1
TU65528 other upstream 2405074 12126886 ~ 12128425 (-) False G49083
TU65529 other upstream 2405074 12126886 ~ 12128425 (-) True G49083

Expression Profile