Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU66442 |
| length | 1078 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G49739 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 14402710 ~ 14403787 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66415 | lncRNA | downstream | 80 | 14400015 ~ 14402630 (-) | True | G49716 |
| TU66378 | lncRNA | downstream | 182092 | 14220217 ~ 14220618 (-) | True | G49682 |
| TU66377 | lncRNA | downstream | 182930 | 14219510 ~ 14219780 (-) | True | G49681 |
| TU66376 | lncRNA | downstream | 183531 | 14218972 ~ 14219179 (-) | True | G49680 |
| TU66375 | lncRNA | downstream | 183903 | 14217647 ~ 14218807 (-) | True | G49679 |
| TU66447 | lncRNA | upstream | 12604 | 14416391 ~ 14425615 (-) | True | LOC120558545 |
| TU66514 | lncRNA | upstream | 136043 | 14539830 ~ 14544632 (-) | False | map3k12 |
| TU66554 | lncRNA | upstream | 265666 | 14669453 ~ 14672001 (-) | True | G49801 |
| TU66555 | lncRNA | upstream | 269841 | 14673628 ~ 14673848 (-) | True | G49802 |
| TU66562 | lncRNA | upstream | 278923 | 14682710 ~ 14683985 (-) | True | G49807 |
| XM_039800933.1 | mRNA | downstream | 172304 | 14228370 ~ 14230406 (-) | True | taf11 |
| XM_039801596.1 | mRNA | downstream | 198750 | 14195482 ~ 14203960 (-) | True | LOC120559681 |
| XM_039801595.1 | mRNA | downstream | 198750 | 14199459 ~ 14203960 (-) | False | LOC120559681 |
| XM_039799869.1 | mRNA | downstream | 209374 | 14185309 ~ 14193336 (-) | True | LOC120558709 |
| XM_039799871.1 | mRNA | downstream | 260216 | 14140380 ~ 14142494 (-) | True | LOC120558710 |
| XM_039801022.1 | mRNA | upstream | 231 | 14404018 ~ 14409405 (-) | True | si:ch73-217n20.1 |
| XM_039799588.1 | mRNA | upstream | 12549 | 14416336 ~ 14432994 (-) | False | LOC120558545 |
| XM_039799587.1 | mRNA | upstream | 12549 | 14416336 ~ 14432994 (-) | False | LOC120558545 |
| XM_039799586.1 | mRNA | upstream | 12549 | 14416336 ~ 14432994 (-) | False | LOC120558545 |
| XM_039799581.1 | mRNA | upstream | 31458 | 14435245 ~ 14517114 (-) | False | dlgap4a |
| XR_005639168.1 | other | downstream | 257488 | 14140380 ~ 14145222 (-) | False | LOC120558710 |
| TU66001 | other | downstream | 1149238 | 13252412 ~ 13253472 (-) | False | LOC120558587 |
| TU65695 | other | downstream | 1963985 | 12419786 ~ 12438725 (-) | False | prickle3 |
| TU65659 | other | downstream | 2011039 | 12388981 ~ 12391671 (-) | True | fkbp1aa |
| TU65587 | other | downstream | 2179708 | 12220737 ~ 12223002 (-) | False | ppdpfa |
| TU66513 | other | upstream | 128337 | 14532124 ~ 14534605 (-) | True | G49766 |
| TU66613 | other | upstream | 441551 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU66615 | other | upstream | 441551 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU67071 | other | upstream | 1877257 | 16281044 ~ 16283856 (-) | True | G50217 |
| TU67800 | other | upstream | 3284328 | 17688115 ~ 17689760 (-) | True | G50712 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00045121 | True | 1424 | lncRNA | 0.33 | 2 | NC_007134.7 | 41303512 ~ 41305045 (-) |
| grasscarp (Ctenopharyngodon idella) | TU439485 | True | 979 | lncRNA | 0.33 | 2 | CI01000192 | 119718 ~ 195455 (-) |
| rainbow trout (Oncorhynchus mykiss) | TU439485 | True | 313 | lncRNA | 0.45 | 1 | NC_048569.1 | 29389051 ~ 29389363 (+) |
