RNA id: TU68349



Basic Information


Item Value
RNA id TU68349
length 303
lncRNA type inter_gene
GC content 0.33
exon number 2
gene id G51147
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19327652 ~ 19415195 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCTGCTGGTTTTACATTTGATATTTATTGAAACAAAGTAGAGCATCGAGCCAATTtgtaaaaagtaacaaaatatcaGCTATAGCACATTACGTTAACTGTAACAAACCTCAAATTCATGGAGAAGcttataaatatacatatttggATTGGTAGAAACAGTTTGTCTATTTAGAATCATCACAGGGATAGTGAGCAGTTAACTGAGTGGTACTGGAAATCTGTGGTGATGGTAAAATCTGAACAtctgtgatatatatatatacacgtgtctgtgtgtgtgtgtgtgtgtgtATATATATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU68313 lncRNA downstream 99747 19227321 ~ 19227905 (-) True G51122
TU68282 lncRNA downstream 377216 18948833 ~ 18950436 (-) False kcnd3
TU68268 lncRNA downstream 398817 18922863 ~ 18928835 (-) True G51088
TU68243 lncRNA downstream 569151 18758042 ~ 18758501 (-) True G51069
TU68241 lncRNA downstream 587309 18738483 ~ 18740343 (-) True G51068
TU68459 lncRNA upstream 41457 19456652 ~ 19459405 (-) True G51228
TU68468 lncRNA upstream 180399 19595594 ~ 19597508 (-) True G51236
TU68493 lncRNA upstream 384010 19799205 ~ 19805539 (-) True LOC120558911
TU68516 lncRNA upstream 410216 19825411 ~ 19850660 (-) True G51266
TU68785 lncRNA upstream 647913 20063108 ~ 20063536 (-) True G51468
XM_039800955.1 mRNA downstream 101821 19221020 ~ 19225831 (-) True capza1b
XM_039800735.1 mRNA downstream 249871 18945968 ~ 19077781 (-) False kcnd3
XM_039800316.1 mRNA upstream 23433 19438628 ~ 19575574 (-) True cacna2d3a
XM_039801235.1 mRNA upstream 173089 19588284 ~ 19602069 (-) True atp6ap1lb
XM_039801619.1 mRNA upstream 189561 19604756 ~ 19614597 (-) True b4galt3
XM_039801413.1 mRNA upstream 200451 19615646 ~ 19632023 (-) True bgnb
XM_039800432.1 mRNA upstream 221819 19637014 ~ 19649377 (-) True si:dkey-32e6.6
TU68271 other downstream 440899 18880365 ~ 18886753 (-) False LOC120558627
XR_005639183.1 other downstream 1441319 17839544 ~ 17886333 (-) False zbtb46
TU67800 other downstream 1637892 17688115 ~ 17689760 (-) True G50712
TU67071 other downstream 3043796 16281044 ~ 16283856 (-) True G50217
TU66615 other downstream 4473835 14845338 ~ 14853817 (-) False G49845
XR_005639384.1 other upstream 284578 19699773 ~ 19699894 (-) True LOC120559929
XR_005639383.1 other upstream 286135 19701330 ~ 19701451 (-) True LOC120559928
XR_005639385.1 other upstream 291484 19706679 ~ 19706800 (-) True LOC120559930
unassigned_transcript_227 other upstream 905572 20320767 ~ 20320838 (-) True trnae-uuc_54
XR_005639106.1 other upstream 1457513 20872708 ~ 20952518 (-) False LOC120558386

Expression Profile