RNA id: TU74758


Basic Information

Item Value
RNA id TU74758
length 597
RNA type TUCP
GC content 0.49
exon number 3
gene id G55919
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38111171 ~ 38236855 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgttcaggagtgtttgtgtgttcaggtgtgtgtgtatgtgtgtctgtctgtatgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtgtgtatgtgtgtctgtctgtctgtctgtctatctgtctgtctgtctgtgtgtgtgtgtgtgtctgttcaggtgtgtgtgtgtgggtgtgtgtgttcaggtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgttcaggtgtgtgtgtgtgtgtgtatgtgtgtgtgtgggtgtgtgtgttcagtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgggtgtgtgtgttcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgtttgtgtgtgggtgtttgcctgtgtgtgtgtttgtgtgtgggtgtgtgtgtttgcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74728 lncRNA upstream 118500 37992178 ~ 37992671 (+) False srpk3
TU74714 lncRNA upstream 160511 37950323 ~ 37950660 (+) True G55888
TU74685 lncRNA upstream 170543 37863281 ~ 37940628 (+) True G55862
TU74709 lncRNA upstream 185043 37925745 ~ 37926128 (+) True G55883
TU74708 lncRNA upstream 190342 37917810 ~ 37920829 (+) True G55882
TU74775 lncRNA downstream 12985 38179985 ~ 38180676 (+) True G55929
TU74778 lncRNA downstream 27387 38194387 ~ 38194852 (+) False G55932
TU74781 lncRNA downstream 27387 38194387 ~ 38194852 (+) True G55932
TU74782 lncRNA downstream 27387 38194387 ~ 38194852 (+) False G55932
TU74789 lncRNA downstream 87293 38254293 ~ 38268002 (+) True G55938
XM_039800475.1 mRNA upstream 118154 37953744 ~ 37993017 (+) True srpk3
XM_039800788.1 mRNA upstream 169201 37743984 ~ 37941970 (+) True plxnb3
XM_039800474.1 mRNA upstream 377774 37716912 ~ 37733397 (+) True LOC120559052
XM_039800473.1 mRNA upstream 395166 37674109 ~ 37716005 (+) True abcd1
XM_039800472.1 mRNA upstream 461116 37620630 ~ 37650055 (+) True ccdc120a
XM_039801731.1 mRNA downstream 106260 38273260 ~ 38302427 (+) True mecp2
XM_039799294.1 mRNA downstream 195482 38362482 ~ 38377654 (+) True rtca
XM_039800482.1 mRNA downstream 245062 38412062 ~ 38439413 (+) True cxxc1a
XM_039800963.1 mRNA downstream 274402 38441402 ~ 38473917 (+) True hdac6
XM_039800483.1 mRNA downstream 321509 38488509 ~ 38497459 (+) True lhfpl4b
TU74653 other upstream 377895 37686769 ~ 37733276 (+) True G55842
TU74652 other upstream 395190 37686769 ~ 37715981 (+) False G55842
TU74631 other upstream 595800 37509624 ~ 37515371 (+) False G55835
TU74629 other upstream 596036 37509624 ~ 37515135 (+) True G55835
TU74630 other upstream 596036 37509624 ~ 37515135 (+) False G55835
TU74841 other downstream 213627 38380627 ~ 38392578 (+) True LOC120558454
TU74819 other downstream 269080 38436080 ~ 38437223 (+) True G55956
TU74811 other downstream 404181 38571181 ~ 38580336 (+) False irak1
TU74910 other downstream 638412 38805412 ~ 38936013 (+) False LOC120559064
TU74943 other downstream 692773 38859773 ~ 38895663 (+) True G56032

Expression Profile