RNA id: TU74923


Basic Information

Item Value
RNA id TU74923
length 242
lncRNA type read_through
GC content 0.50
exon number 3
gene id G56015
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38802837 ~ 38901910 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtgtgtgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74926 lncRNA upstream 108933 38692088 ~ 38693904 (+) True G56018
TU74925 lncRNA upstream 109267 38691230 ~ 38693570 (+) True G56017
TU74924 lncRNA upstream 111275 38690816 ~ 38691562 (+) True G56016
TU74928 lncRNA upstream 122220 38679405 ~ 38680617 (+) True G56020
TU74888 lncRNA upstream 125122 38677325 ~ 38677715 (+) True G56009
TU74950 lncRNA downstream 6945 38908855 ~ 38909200 (+) True G56036
TU74951 lncRNA downstream 8025 38909935 ~ 38910294 (+) True G56037
TU74954 lncRNA downstream 8402 38910312 ~ 38957054 (+) False G56038
TU74953 lncRNA downstream 23658 38925568 ~ 38957054 (+) True G56038
TU74980 lncRNA downstream 128075 39029985 ~ 39030520 (+) False LOC120559065
XM_039801383.1 mRNA upstream 130193 38628960 ~ 38672644 (+) True hcfc1b
XM_039801967.1 mRNA upstream 178898 38614203 ~ 38623939 (+) True LOC120559889
XM_039800485.1 mRNA upstream 199109 38571156 ~ 38603728 (+) True irak1
XM_039800483.1 mRNA upstream 305378 38488509 ~ 38497459 (+) True lhfpl4b
XM_039800963.1 mRNA upstream 328920 38441402 ~ 38473917 (+) True hdac6
XM_039800488.1 mRNA downstream 70500 38972410 ~ 39083390 (+) True LOC120559065
XM_039799996.1 mRNA downstream 195221 39097131 ~ 39114868 (+) True si:ch211-180f4.1
XM_039800001.1 mRNA downstream 230510 39132420 ~ 39186033 (+) True otud5a
XM_039800000.1 mRNA downstream 288173 39190083 ~ 39200407 (+) True pim2
XM_039799999.1 mRNA downstream 305820 39207730 ~ 39246036 (+) False slc35a2
TU74811 other upstream 222501 38571181 ~ 38580336 (+) False irak1
TU74819 other upstream 365614 38436080 ~ 38437223 (+) True G55956
TU74841 other upstream 410259 38380627 ~ 38392578 (+) True LOC120558454
TU74758 other upstream 635837 38111171 ~ 38167000 (+) False G55919
TU74966 other downstream 111748 39013658 ~ 39028517 (+) False LOC120559065
TU74991 other downstream 177270 39079180 ~ 39083496 (+) False LOC120559065
TU75020 other downstream 347258 39249168 ~ 39270428 (+) True G56072
TU75121 other downstream 621236 39523146 ~ 39545307 (+) False G56112
TU75107 other downstream 629243 39531153 ~ 39564268 (+) False G56112

Expression Profile