RNA id: TU74924



Basic Information


Item Value
RNA id TU74924
length 244
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G56016
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38690816 ~ 38691562 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacagacacacacacacacagacacagagacacacacagagacacacacacacacacacacacacacagagacacacacagagacacacacacagacacagagacacacacagagacacacacacacacacacacacacacagagacacagacacagagacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74928 lncRNA upstream 10199 38679405 ~ 38680617 (+) True G56020
TU74888 lncRNA upstream 13101 38677325 ~ 38677715 (+) True G56009
TU74887 lncRNA upstream 31544 38644859 ~ 38659272 (+) True G56008
TU74886 lncRNA upstream 49710 38640675 ~ 38641106 (+) True G56007
TU74870 lncRNA upstream 147309 38538763 ~ 38543507 (+) True G55996
TU74926 lncRNA downstream 526 38692088 ~ 38693904 (+) True G56018
TU74902 lncRNA downstream 1563 38693125 ~ 38810780 (+) False LOC120559555
TU74923 lncRNA downstream 111275 38802837 ~ 38901910 (+) True G56015
TU74897 lncRNA downstream 115750 38807312 ~ 38810780 (+) True LOC120559555
TU74901 lncRNA downstream 115750 38807312 ~ 38810780 (+) False LOC120559555
XM_039801383.1 mRNA upstream 18172 38628960 ~ 38672644 (+) True hcfc1b
XM_039801967.1 mRNA upstream 66877 38614203 ~ 38623939 (+) True LOC120559889
XM_039800485.1 mRNA upstream 87088 38571156 ~ 38603728 (+) True irak1
XM_039800483.1 mRNA upstream 193357 38488509 ~ 38497459 (+) True lhfpl4b
XM_039800963.1 mRNA upstream 216899 38441402 ~ 38473917 (+) True hdac6
XM_039800486.1 mRNA downstream 95759 38787321 ~ 38804328 (+) True LOC120559063
XM_039801376.1 mRNA downstream 119536 38811098 ~ 38814870 (+) False LOC120559555
XM_039801348.1 mRNA downstream 119541 38811103 ~ 38814869 (+) False LOC120559555
XM_039801360.1 mRNA downstream 119541 38811103 ~ 38814869 (+) False LOC120559555
XM_039801359.1 mRNA downstream 119541 38811103 ~ 38814869 (+) False LOC120559555
TU74811 other upstream 110480 38571181 ~ 38580336 (+) False irak1
TU74819 other upstream 253593 38436080 ~ 38437223 (+) True G55956
TU74841 other upstream 298238 38380627 ~ 38392578 (+) True LOC120558454
TU74758 other upstream 523816 38111171 ~ 38167000 (+) False G55919
TU74910 other downstream 113850 38805412 ~ 38936013 (+) False LOC120559064
TU74943 other downstream 168211 38859773 ~ 38895663 (+) True G56032
TU74946 other downstream 183265 38874827 ~ 38899283 (+) True G56033
TU74949 other downstream 187454 38879016 ~ 38880382 (+) True G56035
TU74909 other downstream 194806 38886368 ~ 38936013 (+) False LOC120559064

Expression Profile