RNA id: TU74949


Basic Information

Item Value
RNA id TU74949
length 286
RNA type TUCP
GC content 0.55
exon number 2
gene id G56035
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38879016 ~ 38880382 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcatctgaacacacctccctgtaagaccagaatgcatctgaacacacctccctgtaagaccagcacgcccagaatgtacctgaacacacctccctgtaagaccagcacacccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgtacctgaacacacctccctgtaagaccagcacgcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74927 lncRNA upstream 22145 38817206 ~ 38856871 (+) True G56019
TU74940 lncRNA upstream 50877 38826593 ~ 38828139 (+) True G56030
TU74937 lncRNA upstream 57046 38821259 ~ 38821970 (+) True G56029
TU74922 lncRNA upstream 61468 38816636 ~ 38817548 (+) True G56014
TU74899 lncRNA upstream 63815 38810830 ~ 38815201 (+) False LOC120559555
TU74950 lncRNA downstream 28473 38908855 ~ 38909200 (+) True G56036
TU74951 lncRNA downstream 29553 38909935 ~ 38910294 (+) True G56037
TU74954 lncRNA downstream 29930 38910312 ~ 38957054 (+) False G56038
TU74953 lncRNA downstream 45186 38925568 ~ 38957054 (+) True G56038
TU74980 lncRNA downstream 149603 39029985 ~ 39030520 (+) False LOC120559065
XM_039801376.1 mRNA upstream 64146 38811098 ~ 38814870 (+) False LOC120559555
XM_039801348.1 mRNA upstream 64147 38811103 ~ 38814869 (+) False LOC120559555
XM_039801360.1 mRNA upstream 64147 38811103 ~ 38814869 (+) False LOC120559555
XM_039801359.1 mRNA upstream 64147 38811103 ~ 38814869 (+) False LOC120559555
XM_039801377.1 mRNA upstream 64147 38811103 ~ 38814869 (+) False LOC120559555
XM_039800488.1 mRNA downstream 92028 38972410 ~ 39083390 (+) True LOC120559065
XM_039799996.1 mRNA downstream 216749 39097131 ~ 39114868 (+) True si:ch211-180f4.1
XM_039800001.1 mRNA downstream 252038 39132420 ~ 39186033 (+) True otud5a
XM_039800000.1 mRNA downstream 309701 39190083 ~ 39200407 (+) True pim2
XM_039799999.1 mRNA downstream 327348 39207730 ~ 39246036 (+) False slc35a2
TU74811 other upstream 298680 38571181 ~ 38580336 (+) False irak1
TU74819 other upstream 441793 38436080 ~ 38437223 (+) True G55956
TU74841 other upstream 486438 38380627 ~ 38392578 (+) True LOC120558454
TU74758 other upstream 712016 38111171 ~ 38167000 (+) False G55919
TU74909 other downstream 5986 38886368 ~ 38936013 (+) False LOC120559064
TU74966 other downstream 133276 39013658 ~ 39028517 (+) False LOC120559065
TU74991 other downstream 198798 39079180 ~ 39083496 (+) False LOC120559065
TU75020 other downstream 368786 39249168 ~ 39270428 (+) True G56072
TU75121 other downstream 642764 39523146 ~ 39545307 (+) False G56112

Expression Profile