RNA id: TU74986


Basic Information

Item Value
RNA id TU74986
length 338
lncRNA type read_through
GC content 0.40
exon number 2
gene id G56059
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39049867 ~ 39110796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gggtgaattaagggtttatttcaaccaaaccacagtggtgattgttggaacagtggaaagatgaaccaagacggcttttgatagttttatttagtttctgtccactttgaatgaagtgtgttttacgatgataaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggtggagatatgctggctctatacacgctaaaagtcctgattatttacatggagtctggcggag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74984 lncRNA upstream 1012 39047704 ~ 39048855 (+) True G56058
TU74980 lncRNA upstream 19347 39029985 ~ 39030520 (+) False LOC120559065
TU74981 lncRNA upstream 19347 39030253 ~ 39030520 (+) False LOC120559065
TU74954 lncRNA upstream 92813 38910312 ~ 38957054 (+) False G56038
TU74953 lncRNA upstream 92813 38925568 ~ 38957054 (+) True G56038
TU74993 lncRNA downstream 2967 39113763 ~ 39156172 (+) False si:ch211-180f4.1
TU74994 lncRNA downstream 2967 39113763 ~ 39114606 (+) False si:ch211-180f4.1
TU75016 lncRNA downstream 7246 39118042 ~ 39121728 (+) True G56069
TU75022 lncRNA downstream 71705 39182501 ~ 39252514 (+) False G56072
TU75031 lncRNA downstream 109043 39219839 ~ 39222817 (+) True G56075
XM_039800487.1 mRNA upstream 112024 38843562 ~ 38937843 (+) True LOC120559064
XM_039801339.1 mRNA upstream 234998 38811104 ~ 38814869 (+) False LOC120559555
XM_039800001.1 mRNA downstream 21624 39132420 ~ 39186033 (+) True otud5a
XM_039800000.1 mRNA downstream 79287 39190083 ~ 39200407 (+) True pim2
XM_039799999.1 mRNA downstream 96934 39207730 ~ 39246036 (+) False slc35a2
XM_039799998.1 mRNA downstream 96934 39207730 ~ 39237669 (+) True slc35a2
XM_039800155.1 mRNA downstream 171213 39282009 ~ 39313729 (+) True bcap31
TU74966 other upstream 21350 39013658 ~ 39028517 (+) False LOC120559065
TU74909 other upstream 113854 38886368 ~ 38936013 (+) False LOC120559064
TU74946 other upstream 150584 38874827 ~ 38899283 (+) True G56033
TU74943 other upstream 154204 38859773 ~ 38895663 (+) True G56032
TU75020 other downstream 138372 39249168 ~ 39270428 (+) True G56072
TU75121 other downstream 412350 39523146 ~ 39545307 (+) False G56112
TU75107 other downstream 420357 39531153 ~ 39564268 (+) False G56112
TU75120 other downstream 420357 39531153 ~ 39555987 (+) False G56112
TU75122 other downstream 420357 39531153 ~ 39545307 (+) False G56112

Expression Profile