RNA id: TU74993


Basic Information

Item Value
RNA id TU74993
length 238
lncRNA type read_through
GC content 0.50
exon number 3
gene id si:ch211-180f4.1
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39097131 ~ 39156172 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctcgctctttgtctctgtctctctctctctctctctctctctgtctctctctctctgtctctctctctgtctctctctctctgtctctctctctgtctctctctctctgtctctctctgtctctctctctctctctctgtctctctctgtctctctctctgtctctctctctgtctctctctctctctctctctctgtctctctctctctctctgtgtctctctctctctctctctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74986 lncRNA upstream 2967 39049867 ~ 39110796 (+) True G56059
TU74984 lncRNA upstream 64908 39047704 ~ 39048855 (+) True G56058
TU74980 lncRNA upstream 83243 39029985 ~ 39030520 (+) False LOC120559065
TU74981 lncRNA upstream 83243 39030253 ~ 39030520 (+) False LOC120559065
TU74954 lncRNA upstream 156709 38910312 ~ 38957054 (+) False G56038
TU75022 lncRNA downstream 26329 39182501 ~ 39252514 (+) False G56072
TU75031 lncRNA downstream 63667 39219839 ~ 39222817 (+) True G56075
TU75032 lncRNA downstream 68286 39224458 ~ 39224699 (+) True G56076
TU74977 lncRNA downstream 81511 39237683 ~ 39242219 (+) True G56053
TU75028 lncRNA downstream 92883 39249055 ~ 39252514 (+) False G56072
XM_039800488.1 mRNA upstream 30373 38972410 ~ 39083390 (+) True LOC120559065
XM_039800487.1 mRNA upstream 175920 38843562 ~ 38937843 (+) True LOC120559064
XM_039801343.1 mRNA upstream 298894 38811104 ~ 38814869 (+) False LOC120559555
XM_039800000.1 mRNA downstream 33911 39190083 ~ 39200407 (+) True pim2
XM_039799999.1 mRNA downstream 51558 39207730 ~ 39246036 (+) False slc35a2
XM_039799998.1 mRNA downstream 51558 39207730 ~ 39237669 (+) True slc35a2
XM_039800155.1 mRNA downstream 125837 39282009 ~ 39313729 (+) True bcap31
XM_039799938.1 mRNA downstream 261160 39417332 ~ 40418704 (+) True kcnd1
TU74991 other upstream 30267 39079180 ~ 39083496 (+) False LOC120559065
TU74966 other upstream 85246 39013658 ~ 39028517 (+) False LOC120559065
TU74909 other upstream 177750 38886368 ~ 38936013 (+) False LOC120559064
TU74946 other upstream 214480 38874827 ~ 38899283 (+) True G56033
TU75020 other downstream 92996 39249168 ~ 39270428 (+) True G56072
TU75121 other downstream 366974 39523146 ~ 39545307 (+) False G56112
TU75107 other downstream 374981 39531153 ~ 39564268 (+) False G56112
TU75120 other downstream 374981 39531153 ~ 39555987 (+) False G56112
TU75122 other downstream 374981 39531153 ~ 39545307 (+) False G56112

Expression Profile