RNA id: TU75121



Basic Information


Item Value
RNA id TU75121
length 412
RNA type TUCP
GC content 0.50
exon number 2
gene id G56112
representative False

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39523146 ~ 39564268 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtctgtatgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtatgtgtgtatgtatgtgtgtgtgtgtatgtctgtctgtgtgtgtgtgtgtgtgtgtatgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtctctctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccttaccTGTTTGTCACTCAGCAGATAGATGTACTGATGGTCAGGACTGAACACCATTTCTCTCAGGATCGGCTTCCCTTCCACCACGGTCACCGTCTCATACAGCAAAGCATTCTGGGCCGGCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU75079 lncRNA upstream 9874 39373266 ~ 39513272 (+) False G56097
TU75086 lncRNA upstream 9874 39397773 ~ 39513272 (+) False G56097
TU75083 lncRNA upstream 9874 39405812 ~ 39513272 (+) False G56097
TU75085 lncRNA upstream 9874 39451331 ~ 39513272 (+) False G56097
TU75075 lncRNA upstream 9874 39458156 ~ 39513272 (+) False G56097
TU75088 lncRNA downstream 14621 39559928 ~ 39614234 (+) True G56098
TU75131 lncRNA downstream 54573 39599880 ~ 39604607 (+) True G56121
TU75123 lncRNA downstream 56854 39602161 ~ 39602553 (+) True G56113
TU75134 lncRNA downstream 59006 39604313 ~ 39610210 (+) True G56123
TU75143 lncRNA downstream 111352 39656659 ~ 39957074 (+) False G56127
XM_039800155.1 mRNA upstream 209417 39282009 ~ 39313729 (+) True bcap31
XM_039799999.1 mRNA upstream 277110 39207730 ~ 39246036 (+) False slc35a2
XM_039799998.1 mRNA upstream 285477 39207730 ~ 39237669 (+) True slc35a2
XM_039800000.1 mRNA upstream 322739 39190083 ~ 39200407 (+) True pim2
XM_039800001.1 mRNA upstream 337113 39132420 ~ 39186033 (+) True otud5a
XM_039799945.1 mRNA downstream 209232 39754539 ~ 39760147 (+) True LOC120558742
XM_039799942.1 mRNA downstream 263556 39808863 ~ 39811404 (+) True LOC120558738
XM_039799944.1 mRNA downstream 350658 39895965 ~ 39897486 (+) True LOC120558740
XM_039799447.1 mRNA downstream 360383 39905690 ~ 39918513 (+) True LOC120558439
XM_039799940.1 mRNA downstream 614700 40160007 ~ 40186156 (+) False ptpn18
TU75020 other upstream 252718 39249168 ~ 39270428 (+) True G56072
TU74991 other upstream 439650 39079180 ~ 39083496 (+) False LOC120559065
TU74966 other upstream 494629 39013658 ~ 39028517 (+) False LOC120559065
TU74909 other upstream 587133 38886368 ~ 38936013 (+) False LOC120559064
TU74946 other upstream 623863 38874827 ~ 38899283 (+) True G56033
TU75149 other downstream 263550 39808857 ~ 39918363 (+) True G56127
TU76202 other downstream 471678 40016985 ~ 40017315 (+) True G56807
TU76217 other downstream 557078 40102385 ~ 40148620 (+) True G56818
TU76220 other downstream 565151 40110458 ~ 40111288 (+) True G56819
TU76286 other downstream 910802 40456109 ~ 40457175 (+) True G56847

Expression Profile