RNA id: TU76203


Basic Information

Item Value
RNA id TU76203
length 425
lncRNA type intronic
GC content 0.44
exon number 1
gene id G56808
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40026309 ~ 40026733 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU75153 lncRNA upstream 14492 39656659 ~ 40011817 (+) False G56127
TU75143 lncRNA upstream 69235 39656659 ~ 39957074 (+) False G56127
TU75166 lncRNA upstream 210019 39723782 ~ 39816290 (+) True G56136
TU75170 lncRNA upstream 261376 39746452 ~ 39764933 (+) False G56138
TU75169 lncRNA upstream 261376 39764305 ~ 39764933 (+) True G56138
TU76208 lncRNA downstream 6888 40033621 ~ 40038323 (+) True G56811
TU76205 lncRNA downstream 11914 40038647 ~ 40044842 (+) True G56810
TU76206 lncRNA downstream 11914 40038647 ~ 40044842 (+) False G56810
TU76210 lncRNA downstream 17191 40043924 ~ 40044615 (+) True G56812
TU76229 lncRNA downstream 103707 40130440 ~ 40267667 (+) False G56827
XM_039799447.1 mRNA upstream 107796 39905690 ~ 39918513 (+) True LOC120558439
XM_039799944.1 mRNA upstream 128823 39895965 ~ 39897486 (+) True LOC120558740
XM_039799942.1 mRNA upstream 214905 39808863 ~ 39811404 (+) True LOC120558738
XM_039799945.1 mRNA upstream 266162 39754539 ~ 39760147 (+) True LOC120558742
XM_039800155.1 mRNA upstream 712580 39282009 ~ 39313729 (+) True bcap31
XM_039799940.1 mRNA downstream 133274 40160007 ~ 40186156 (+) False ptpn18
XM_039799941.1 mRNA downstream 133277 40160010 ~ 40186156 (+) True ptpn18
XM_039801763.1 mRNA downstream 403382 40430115 ~ 40451414 (+) True hm13
XM_039801764.1 mRNA downstream 403384 40430117 ~ 40451414 (+) False hm13
XM_039801778.1 mRNA downstream 437818 40464551 ~ 40464926 (+) True LOC120559775
TU76202 other upstream 8994 40016985 ~ 40017315 (+) True G56807
TU75149 other upstream 107946 39808857 ~ 39918363 (+) True G56127
TU75107 other upstream 462041 39531153 ~ 39564268 (+) False G56112
TU75120 other upstream 470322 39531153 ~ 39555987 (+) False G56112
TU75108 other upstream 470322 39531633 ~ 39555987 (+) True G56112
TU76217 other downstream 75652 40102385 ~ 40148620 (+) True G56818
TU76220 other downstream 83725 40110458 ~ 40111288 (+) True G56819
TU76286 other downstream 429376 40456109 ~ 40457175 (+) True G56847
TU76475 other downstream 1073861 41100594 ~ 41102972 (+) False LOC120559073
TU76436 other downstream 1094542 41121275 ~ 41129376 (+) True G56947

Expression Profile