RNA id: TU76864


Basic Information

Item Value
RNA id TU76864
length 268
lncRNA type inter_gene
GC content 0.51
exon number 3
gene id G57223
representative True

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 41684815 ~ 41702843 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctccctctctctctctctctctctctctctctctctctctctctctctgtctctctctctgtctctgtctctctctctgtctctgtctctctctctgtctctctctctctctctctgtctctctctctctgtctctgtctctctctctctgtctctgtctctctctctgtctctctctcgctctgtctctctctctgtctctctctctctcgctctgtctctgtctctctctctctgtctctgtctctgtctctgtctctctctctct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76856 lncRNA upstream 3283 41659886 ~ 41681532 (+) True G57217
TU76855 lncRNA upstream 3283 41659919 ~ 41681532 (+) False G57217
TU76854 lncRNA upstream 4761 41659886 ~ 41680054 (+) False G57217
TU76846 lncRNA upstream 107022 41576629 ~ 41577793 (+) True G57209
TU76503 lncRNA upstream 485736 41189580 ~ 41199079 (+) True G56999
TU76886 lncRNA downstream 58033 41760876 ~ 41764282 (+) True G57241
TU76958 lncRNA downstream 177243 41880086 ~ 41880374 (+) True G57301
XR_005639140.1 lncRNA downstream 203655 41906498 ~ 41911871 (+) True LOC120558547
TU76995 lncRNA downstream 216054 41918897 ~ 41919116 (+) True G57327
XR_005639144.1 lncRNA downstream 302668 42005511 ~ 42008260 (+) True LOC120558566
XM_039799673.1 mRNA upstream 14345 41654765 ~ 41670470 (+) False LOC120558614
XM_039799672.1 mRNA upstream 14345 41654767 ~ 41670470 (+) True LOC120558614
XM_039799671.1 mRNA upstream 78594 41600488 ~ 41606221 (+) True LOC120558613
XM_039799684.1 mRNA upstream 105750 41571688 ~ 41579065 (+) True LOC120558621
XM_039799605.1 mRNA downstream 242180 41945023 ~ 41948527 (+) True LOC120558558
XM_039799606.1 mRNA downstream 242180 41945023 ~ 41948527 (+) False LOC120558558
XM_039799609.1 mRNA downstream 324929 42027772 ~ 42034763 (+) True LOC120558560
XM_039800506.1 mRNA downstream 701979 42404822 ~ 42411394 (+) True LOC120559084
XM_039799610.1 mRNA downstream 709276 42412119 ~ 42413646 (+) True LOC120558561
TU76436 other upstream 555439 41121275 ~ 41129376 (+) True G56947
TU76475 other upstream 581843 41100594 ~ 41102972 (+) False LOC120559073
TU76286 other upstream 1227640 40456109 ~ 40457175 (+) True G56847
TU76217 other upstream 1536195 40102385 ~ 40148620 (+) True G56818
TU77125 other downstream 769077 42471920 ~ 42473941 (+) False LOC120558567
TU77616 other downstream 1675503 43378346 ~ 43385991 (+) True zgc:113363
XR_005639387.1 other downstream 1815107 43517950 ~ 43518074 (+) True LOC120559932
TU77790 other downstream 2249715 43952558 ~ 43952942 (+) False LOC120559089
XR_005639290.1 other downstream 2279159 43982002 ~ 43984512 (+) False LOC120559493

Expression Profile