Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039799388.1 |
| length | 1064 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 8 |
| gene id | zgc:56699 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 11696956 ~ 11699952 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006399 | tRNA metabolic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65307 | lncRNA | downstream | 81247 | 11607970 ~ 11615709 (-) | True | G48911 |
| TU65304 | lncRNA | downstream | 90342 | 11605733 ~ 11606614 (-) | True | G48910 |
| TU65301 | lncRNA | downstream | 96448 | 11600292 ~ 11600508 (-) | True | G48907 |
| TU65276 | lncRNA | downstream | 117968 | 11576539 ~ 11578988 (-) | True | G48886 |
| TU65296 | lncRNA | downstream | 123967 | 11564071 ~ 11572989 (-) | True | G48903 |
| TU65449 | lncRNA | upstream | 186031 | 11885965 ~ 11891046 (-) | True | srxn1 |
| TU65457 | lncRNA | upstream | 259445 | 11959379 ~ 11979035 (-) | False | peds1 |
| TU65465 | lncRNA | upstream | 303333 | 12003267 ~ 12063255 (-) | True | G49024 |
| TU65530 | lncRNA | upstream | 419724 | 12119658 ~ 12121550 (-) | True | G49084 |
| TU65531 | lncRNA | upstream | 419818 | 12119752 ~ 12121550 (-) | False | G49084 |
| XM_039799512.1 | mRNA | downstream | 110986 | 11580293 ~ 11585970 (-) | True | si:dkey-190g6.2 |
| XM_039801982.1 | mRNA | downstream | 165878 | 11521321 ~ 11531078 (-) | True | racgap1 |
| XM_039801861.1 | mRNA | downstream | 178468 | 11510733 ~ 11518488 (-) | True | bin2a |
| XM_039800359.1 | mRNA | downstream | 188619 | 11504368 ~ 11508337 (-) | False | LOC120558961 |
| XM_039801531.1 | mRNA | downstream | 198892 | 11489393 ~ 11498064 (-) | False | pou6f1 |
| XM_039801218.1 | mRNA | upstream | 16685 | 11716619 ~ 11731081 (-) | True | cd63 |
| XM_039801332.1 | mRNA | upstream | 46373 | 11746307 ~ 11750609 (-) | False | ormdl2 |
| XM_039801330.1 | mRNA | upstream | 46373 | 11746307 ~ 11749685 (-) | True | ormdl2 |
| XM_039801331.1 | mRNA | upstream | 47778 | 11747712 ~ 11750559 (-) | False | ormdl2 |
| XM_039800949.1 | mRNA | upstream | 84869 | 11784803 ~ 11806444 (-) | True | spats2 |
| TU65038 | other | downstream | 1042138 | 10642719 ~ 10654818 (-) | True | G48697 |
| TU64778 | other | downstream | 1671131 | 10024994 ~ 10025825 (-) | True | G48523 |
| TU64679 | other | downstream | 1972822 | 9708331 ~ 9724134 (-) | False | olfml3a |
| TU64676 | other | downstream | 1998849 | 9690530 ~ 9698107 (-) | False | olfml3a |
| XR_005639386.1 | other | downstream | 3590761 | 8106061 ~ 8106195 (-) | True | LOC120559931 |
| TU65448 | other | upstream | 189007 | 11888941 ~ 11891046 (-) | False | srxn1 |
| TU65528 | other | upstream | 426952 | 12126886 ~ 12128425 (-) | False | G49083 |
| TU65529 | other | upstream | 426952 | 12126886 ~ 12128425 (-) | True | G49083 |
| XR_005639172.1 | other | upstream | 449860 | 12149794 ~ 12169209 (-) | False | dnmt3ba |
| TU65587 | other | upstream | 520803 | 12220737 ~ 12223002 (-) | False | ppdpfa |
