RNA id: XM_039799559.1


Basic Information

Item Value
RNA id XM_039799559.1
length 6170
RNA type mRNA
GC content 0.52
exon number 23
gene id tasorb
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17521928 ~ 17542122 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGAAGAACGTGTACGTCATTTTCACAATGGCGGAGGCTGGGTGAggaggagagtgtgtgtgtgtgtgagtgaagcGGCGCCGTAATTGTTAGATCTACATTGCCCGTTATACGTGCACGGTGCCTGAAAATGGCCCTGAACCCCAACGCGGTGGGGAAAAGGGACTCAGAATGTACCGAGACGGACGATCTACACCCGGAGGGTGGCGAACCCCTGAAGAATTCAGCCGCCACCTCGGCCACAGCCAACCAAAATGGCGATCGGCCTGGATGTGGAGACAGGGTAATGCCCGAACAAGAAGCCCATGAGCGGCGGAGGAGCGCGCAGGCAGATGCCCGGAGCTTTAGCAGTTCGCCCCTGCAAGGCCAGAGACCGAGCGAAGAGCTGCCACGGAGAAATTTTCAAATCCCGAGGAAGATAAGAGAACGGAAAGGCCTGTACCAGTTTCTTTCTCCCGACAGCCGGGAGTTTGAGGACCTTGTGAAGATTGTCTCCTCGTTTTACCTAGACTCATCATCCCGAGCAACCTTCTCCTACTGCAAGGCCAGGCTCATTCACAACGAGCTGCTGGAGAAGGAGtTCATTGAGAAGCGGAGAGAGATGAAGCAGGAGGGGAGGACAGAACAAGAACTGACTGAGTCGTACTGCTTCCTTTTTCCAGACAAATCGAAGCTCCTGTGGATCTGTGAAAAGGGTCTGTCGGTTGGGCACTCCCGGATTACTACACTAGGAAATCCATCAATGGGTGTTTATGTTTCCAAATATTCTGATCTGTTACAAATCAATCCCTTTGAAGTGGGCTCATCTGGAGACATGATCGTTTTTAAAGTTATGAGGGGCCGAATAAAGCACATTAATGACAACATACCTAAGAATGCTTTGGAACCTTCTACCAAGGTTGATTGCCACTTGTCCAAAAGTGGCAATAGGGTTACGTCTTTGCTGTCTTACAGGGCTTTTGAGCTCACACAGCAATATTTTTTCGAGTTTGCATTTGATGAGATCAAAGCACGGCCCAGGCATGTGTGCCCCTATGCTGTGCTTTCCTTCAAGTACAAAGGCAAGGAGGCTGCGGCCTCTCCTATGACTTCACACAGGTTTAACACTATTTCCCCTGAAGGAAGCCGagGGAAGAGCTGCTACACTGTGTGGAGTGGTCCACTAGTGAACAAGGGCCTGGAGTTATTCCCAATCTGTTTACGATCCTCCTCGCGCCCATACCTCCCTTTCAAACTGCCTGAGAAGCTAGAGGTGAGTCGAGGCATGCAGCTGGATCAGGTGAAAAGAAAGATTCCCTCTGTGCTCTTTTCTTGGGACACCTACAGCGCATCACGGGAAGTGATGAAATGTGGGATGTCCTGCAGCCTGTTTGAGGTGGTGGAGGGTAAAGGCAAACCAACCAGTGGCAGCTTGGTAGCGCTGGTCAACAAACTGGAGAGGGACAGGATGGTGCTGGTGAAGTCCTTGTTTGACAGGGGCTTTCTCTTCCTGCTGTCCTCAGCGCAGATGATTGAGTCCAAAGAGCGACGGGGGCGTGTTGAGAAGAACCTGCAAGCATTATTCATCTTTCAGGAGTCAAGGATGGTTGTCAAGTATTCATCCAGATTGTTCGAGCCAGAGCCACTGACGACAGAGCCTCAGCCTGCTATCCTGTCCTCCATGGATCCCTTCATCCCTGCTCTGCACTACTCGCTGTTCAAGTTGCGCCACAACCCAGGCAAGGACCTCAGCTCTGGAGTGGAGCGCCAGGCCACTGATTACCTAACTCGTATGGATTCAGGCACGGTGCGGCCGTTCATTCTGCCCGACTACAAACATAACGTGGACGATAGGATCAACCCGCTCGCAGTGCCCAGACCCAAATTTAACATGGATGCCGTGCTGCGTTCTTACGTCAACACCCCTGTCAATTACATTTTACCTCTGAACAAGACGAAGGACATCATTGAAAGAATACGGAACCCCACACCCATACCCATACCTCTACCCCTACCCCTACCCCTACCCTTACCCACACCTGCTCCAGCCCCAGTGGAATACAGCCCTGTTTCTGACTGGGGTGGCTCGGACAGGGGCTCAGACAGAGCAGAGAGACCTGCAGAAAGGCTGCCCCAGGAGAGGCCACCTCCAGAGAGGCCAGCACAGGAGAAGCCACCCTCAGAGAGCGGCAGGCGGAGGCAAGGGTTGGCCCATTCTAACGGGGCCCAGTTGCAGCAAACGTCCAATATTGAGCCCCAGTCTCAGCCCCCTCAGAGGTTGCGGCTGTCCCAGAATGAGTATGATAAAGACAAGATGAAACAGTTGCTTAAGCTGATCCAACTTCATAAGAAAGCCCTAGTGAAGGATCCTGGGAAGGAAAGGGAAGAGGATGGGGCTTGGGACGTCAACAGTCTGAAGAGGAAGTTTGAGGGAGATGAAAGGGGGGGCACGAACAAACACCAACGCACAGATCCGCTGAGCAACGGGGAACCCAGTAGAGGAGCCCAAGCAGATGAGATCGGAGATGAGGGTGGACAGAGCGACAATCTGACAGCAGTGATGGAAAGCATGGGCATCTATGACACTGACCTGAGGGCTCATGGGAACACCAGTGCCTCAGTCAACGAAACCCAGCGCCTTCTCAAGATCCTCCTGGCTACTCTCAACAAAGCCGTGGCTCAGGGCTCAATGTCTGTGCAGCCAAACCACGGTGAGCCATCGACAGGTGCAGGAAGCGGGGAACCTGCCTGCCCTGAACCAGATCCGAAAAAACAAAATGAGCCCACATTTCAAACAAACTACACAGAGGAGGACATGGACTGTAGCCCAGGTAGTCCATTTAGCGCAGGTTCCCCAGCTGAGCAAGCTTACACTTCAGACAACCCAACCTGGGTTAACCCCGCCAATGAAGACAAAGTACAGCCTTTTCCTGAGCCAAAGCCCGAGCCAGAGCCAGAGGCCGTGACGGTGGCAGACAGCTACCCAGAGCCGAAGACGCCTGCAGCCGTGGAAGTAAAAAAGGCGGCTGCACCAGCCACGGTACCAGTTGTAGAGGAAGTTCCCTTCAGGCCCTCCATCAGCCTGGACACCATACTCAACCAGGAAATTCACAGTCTCACCTCTGACATCAAAAACATTATGCAGACTCACCACATCTGCTACTCCTCGCTGCTACCCACACGGTTGCCTCCACACCACTGCTGGCTACCCAACAGCTGCTTCTCAGACTTTGTTACACCCTACGTCTCCCCTGTCCCCATTCAGGGGCATATCAAAGCACTGTGTGATAAGATGGACACGTTGATCCCAGCCCCACCTGCTCCCTCCAAGGGCACTCCTCCACCTCCCCCAGTGACAACATCTGATCTTACAacaccaccccccacccccatgcAGACTTCCAAAACTAAAGCGGACCCCTCCCTGTCGAAGAGCACCACTTCGTCTCAGAGTGGTAAAATGGTCACTGTCAAAGGGACGGCATCCACTAGGCCTAAAATGGAAGGCTCGTCAGCAGAGTTGGGGGTAGAGGTCTATTCTCCCTCTCAAGTCACACCAGACTCTCCAGAGGCCAAGTCCCAAAACCCAGGCCCTGCTCCTGGAAGTGGGTCCGGCCTGCTGGCTGGCAGCCTCATTGGTCAGCTGAAGCCGGAGGTTTTCAGCAGCCTGGTGGAGATCTTTAAGGACGTCACCAAGAACACAGTCAAATTCTACATCTACTCCGGGGACGAGGGGGAGGAGAGCACTGTCTGCAAGGAGATCAAGGAGTACTTGAAAAGTCTTGGCAACAGCGAGTGCAGCCCACAGACGTTTCTGGAAAACAGCTGCAGTTTAGATAAGCTCCTCATCATCATTCAGAACGAGGACATCGCCGCACACGTGCACAAGATCCCGGCTCTAGTGTCTTTGAAGAAGTTGCCTTCAGTGAGCTTCGCTGGAGTTGACACTCTGGACGATGTCAAGAACCACACTTATAATGAGTTGTTTGTGTCTGGAGGCTTCATGGTGTCTGATGAGTTTGTCCTCAACCCTGACCTTATCACGCAGGATCGTTTGCAGGGGCTGCTGAAGTTCTTGGAGGAGCAGAGCACCCCTGAACACCCCTGGCAGTGGAAAGTGCACTGCAAGTCCCAGAAGAAGCTCAAAGAACTCGGGAGGTTAAACACCAATGCCATGGGGCTGCTGAACCTTCTCACAGCCTACCAGAAGAAGCACCTGGTGGAGTTCCTCCCTTATCACGAGTGTGACACCCAGTCGCGTCAGGCTCCAGACCTAGAATGCCTGATCAAACTCCAAGCTCAGCACACACAGCAGCGGCACCTTATCTTCCTCACAGagagGCCATTTGAGATGTTCCTACAGTACTCCAGAAATGGAATAGTAATAGGGAGCATTGATGACGTTATGAGTGGTTTCCACAGTCTGATTGGCTCCATCAGTCAGAATGAGCTCCCAACACCGCCCTCTACAGTGAATGATGAGTGTGTGGAAGAGGAGGACATGTCATTAGACTCTGATGATGGTGAGCCAACCACCATATCGGATCCCTCAGAGCAGAACCAGACAGTTGAGAAGGGGAAGCCTCCACAGCCGCCTCCACCAGAGATGGAGGAGTTTCGTCCTCCGCTCCCAGACCAGCAGGCCACCCCCGAGAGAACGCCAACGCTGTCTGACTACAGTGCTCTCAAAACAGCCATCTCGCAGTTCAAAGCCACCAACCAGATGGGAATAGGCTCTTCGGACATTGGAAGCTTGTCACCAGGAGGTTTTCCTGTGAATCCCCACCAGAGCTTCCTGTGTCCTTCAGCCTCGTGGTCATCTTACACGGGCTCTTCTAGCTATGCGGCCTCCCCGGCCTATCCAGCCTCACCTTGCAGCAGCACCCAGGAACAGGAATACCGCCCCCCAGTCCCAGCCACAGCCTCTAGCACACTCCCAACCCCCCCTGTCATGGCCACAGCAGGACCTCTAGCCAACCTGGCTTCGCTCCCCTTGGAGGTCAAACCTCCCCCTCCACCTCACCTTATGAGGCTGGGCCATACATATGGCTCAGACACTGGAGGAGCTGGGGCTGCTGGGAACTCTCCGCTCACCACCTCCCTCCCCTTCACAGACCATAATGACTCAGCCCAGCCAGGTTACATGGCTGGCATTTCTAAAAATGCTAGCGGGACCCCCACGCAACACGACAGGACACTCTGTGGACCTGGGGAGGTTCTATGGGGGACAGCAGGGGCCAGCACTTGTCAGACTGCTAGCAGCCAGGGTATGGTCACATCTGGCCCAGTGGACCCCAGTGGGCTGCCTAAGACTGGGGAGACCCTTGCAGGTAGCATCCCTGGTAGTCAGGGAGGCAGGACTCCAGTGAATTGTGTTAACAACATTGGAGCTTCTGTGGGCATTCCCACAGTGGCCACCAGGGGGGGCTCAATAGTCAGACCTAAACTGCCTCCACATCCAATGTGTGGTGTGGGCTATGGTAGTATAGGTGGCATCCCTGGACAGATGGATCATGGGCCTATGCGGGGTGGTATGGGTCCTGGTTCTTTAGGGAGTTATCGAGGGAGAGGAGTTCTACCAGGAGGACTTTGGCCTCGGCCAGGACGAGGACATGATCGGGGGGACGGTACTGGAGGTGGACCATACCCTTGGGGTTACCCAGCAGGCAGGGGTGGGGTACAGGATTACTACTCGGactacacatacactcacaatTATGCTCCTCAATAGACAATCATGATCAAAGGGGCAACACAAACGCCATACTCCAGAGACTATTGGAGCTGGCTGAATGTACATATTTCCTTGTCATAAACACATTGATTTAAATCAGTAAATAAGGATCCTGGTTTTCTACATTAATAAAAATTGATACAGGCAGTGCCGAGTGTCCTACTGTCATGTAAACTGTATGTACACACTTTCCATGTGAACTATTTGAGACCCTGTTCAAAccactatatttatatttgccACCAAATGTTGATGGCCTTCCAGCTTCTCGGAATCTATCATGTTATTTCTGTTTGTCCAGGTTTTGAAACGGTTTGTGAACAAGGGGAAAGGCTGatatttttttaaggaaaaaaaattgtgaatgAAATTTCACTTTTGCtgttggttttcttttttttttattttacatagttGGTTGTCTGAAATtctattaaaataaaacatttcaaatctT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU67718 lncRNA downstream 51253 17470207 ~ 17470675 (-) True G50647
TU67638 lncRNA downstream 270654 17250650 ~ 17251274 (-) True G50574
TU67617 lncRNA downstream 316299 17203747 ~ 17205629 (-) True G50561
TU67624 lncRNA downstream 328293 17190077 ~ 17193635 (-) True G50567
TU67605 lncRNA downstream 368501 17152449 ~ 17153427 (-) False G50553
TU67797 lncRNA upstream 140926 17683048 ~ 17683519 (-) True G50709
TU67884 lncRNA upstream 240566 17782688 ~ 17786360 (-) True G50779
TU67914 lncRNA upstream 432633 17974755 ~ 17991671 (-) False samd10b
TU67916 lncRNA upstream 432633 17974755 ~ 18101572 (-) False samd10b
TU67915 lncRNA upstream 461552 18003674 ~ 18024302 (-) False samd10b
XM_039800744.1 mRNA downstream 1358 17405102 ~ 17520570 (-) False LOC120559199
XM_039800745.1 mRNA downstream 19442 17405102 ~ 17502486 (-) False LOC120559199
XM_039800742.1 mRNA downstream 39870 17405102 ~ 17482058 (-) True LOC120559199
XM_039800743.1 mRNA downstream 39870 17405704 ~ 17482058 (-) False LOC120559199
XM_039801397.1 mRNA downstream 163230 17325207 ~ 17358698 (-) True LOC120559574
XM_039799562.1 mRNA upstream 477 17542599 ~ 17546303 (-) False asb14b
XM_039799560.1 mRNA upstream 477 17542599 ~ 17546303 (-) True asb14b
XM_039799561.1 mRNA upstream 477 17542599 ~ 17546093 (-) False asb14b
XM_039799563.1 mRNA upstream 950 17543072 ~ 17546306 (-) False asb14b
XM_039799564.1 mRNA upstream 1032 17543154 ~ 17546306 (-) False asb14b
TU67071 other downstream 1238072 16281044 ~ 16283856 (-) True G50217
TU66613 other downstream 2668111 14845338 ~ 14853817 (-) False G49845
TU66615 other downstream 2668111 14845338 ~ 14853817 (-) False G49845
TU66513 other downstream 2987323 14532124 ~ 14534605 (-) True G49766
XR_005639168.1 other downstream 3376706 14140380 ~ 14145222 (-) False LOC120558710
TU67800 other upstream 145993 17688115 ~ 17689760 (-) True G50712
XR_005639183.1 other upstream 297422 17839544 ~ 17886333 (-) False zbtb46
TU68271 other upstream 1338243 18880365 ~ 18886753 (-) False LOC120558627
XR_005639384.1 other upstream 2157651 19699773 ~ 19699894 (-) True LOC120559929
XR_005639383.1 other upstream 2159208 19701330 ~ 19701451 (-) True LOC120559928

Expression Profile