RNA id: XM_039799563.1


Basic Information

Item Value
RNA id XM_039799563.1
length 1925
RNA type mRNA
GC content 0.48
exon number 9
gene id asb14b
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17542599 ~ 17546306 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTAAATAAGGGcctgttgtgttttttaaacaatggCCTCTTTGTTATGAGAGAATTTGCATATGAGCTGAATGGTGGCAGTTGTTGCTCAGTGGGTCAAAGCTaggtgctgggtctgaagacCCCGTGATCTGATATTTATAGCGGGAGAGATAAAAATAGTTGCAGTACATGTGTGCATACTGAGGAGACTGCTGGCTCTACTGTTGTGAAAGCCACCGAAGGCGCACAGCCATTTGACTGAAGGTTCTCAGGTTCCAGATGTAATGGTCTTGTTTCCCTTACGGCTGTGTCTCCCCAGTGCAGTTGCTTGTGCATTGACCCTTTCTGGATTAACAGATGAACACGGAGACAGAAGATGACTTTTATGAATCGGAGGACGACTTGGATGAAGATGAGGCAGCGCAATATATAATtgaacaaagtctgattgaatATAGAAAGCTCAAAGGATTGACTCCAAGTGATCTGAAACCCAGTGAAGACCCTGATGAGATTTTCAAAGCAATCAAGCAGGGGGATGAAGATGCACTGAACAGACTGGCTGTGCAACCAGAGACTCTGTCAAGAGTTGATGAACGAGGATGGATCCCGCTGCATGAGGCTTCAGCACAGGAGAATAAAAGCATACTAGAGATTATCTTCTCAGCATCACCCCCAGGTGCAGCCCAGTGTCGTACTCTAAAGGGTGAGACACCACTGTTTCTGGCTGTGGTTCATGGACTCAGAGAGAACGCTACATTCCTGTTACAGAACGCTTGTAGCCCGGATCTCCAGAATGATGAGCAGGATTCTCCATTAGTAGCAGCTATTCTGAATGACCAGTACGACTTGGCCACACTATTGCTTCGCTACAATGCCGCAGTAGACCAAACAGGACCATTAAACAGGACAGCTCTACACGAGTCAGCCTTTTTAGGCCTGGAGAACTTTGTCTATCTGCTCCTAGAGTCTGGTGCCAACCCAAATGCATGTGACAtcaaaaagaaaactccactGGGTCTGGCTGCTCAGAATGGACATCTGAATGTGGTGGAGGTGCTGTTACAAAAAGGAGCCCATGTGTGGTGTGAATCGGAGTCAGGCACTATCTTGTTTGATGCAGCAGCATCAGGAAACCCTGACATAATCTCCCTGCTGCTGGAGCATGGAGCAGATCCCAACCTAGTACATCTTTACAGTGGGCACCTGCCAATTCATCGTGTGGCCTACCATGGACACATACTGGCACTGGAGCACCTCATCCCAGTGACTAAGATGGACGCCATGAAGGAAAGTGGGATGAGTCCTCTCCATTCTGCAGCTGCTGGGGGACATGCCCATTGTGTGGAGATGCTGCTCAAAGCTGGCTATGATCCAAACTTCATGCTACACCCAAGGGTGCGCCGCAACTATGATGATGAGCGCAGGTCTTCCCTCTTTTTTGCTGTGTCCAACAATGATCTTCAGTGCACCCGCTTGCTGTTAGAGGCTGGGGCAATGGTGAACCAGGATCCTATCAACTGTTTGCAGGTGGCCCTTAGACAGGGCAACTATGAGCTGATCAACACATTGCTGAAGTTTGGGGCAAATGTAAACTACTACTCCCGTGTCAACACCACTCACTTTCCCTCAGCACTGCAGTACGCCTTGAAAGACGAGGTCATGCTGAGAATGATTCTGAACCATGGGTATGATGTTAAGCGTTGCTTTGACTGTCCGTATGGTGACAGCTCCCATGACTACGCCCCTTGGACGACCTCAATCATCAAAGACATGGTGTTCTGTGAGGTGATAACAGTGTCCTGGCTTAAGCACTTATCTGCTCAGGTGGTGCGCATCATGCTCGACTACACCGACCATGTCTCCTTCTGCACCAAACTCAAGGACACTTTGGAAGAGCAGAAACAGTGGCTGGAGATCTGTCACATTCAAAGTGAGACCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU67718 lncRNA downstream 72397 17470207 ~ 17470675 (-) True G50647
TU67638 lncRNA downstream 291798 17250650 ~ 17251274 (-) True G50574
TU67617 lncRNA downstream 337443 17203747 ~ 17205629 (-) True G50561
TU67624 lncRNA downstream 349437 17190077 ~ 17193635 (-) True G50567
TU67605 lncRNA downstream 389645 17152449 ~ 17153427 (-) False G50553
TU67797 lncRNA upstream 136742 17683048 ~ 17683519 (-) True G50709
TU67884 lncRNA upstream 236382 17782688 ~ 17786360 (-) True G50779
TU67914 lncRNA upstream 428449 17974755 ~ 17991671 (-) False samd10b
TU67916 lncRNA upstream 428449 17974755 ~ 18101572 (-) False samd10b
TU67915 lncRNA upstream 457368 18003674 ~ 18024302 (-) False samd10b
XM_039799559.1 mRNA downstream 950 17521928 ~ 17542122 (-) False tasorb
XM_039799558.1 mRNA downstream 950 17521928 ~ 17542122 (-) True tasorb
XM_039800745.1 mRNA downstream 40586 17405102 ~ 17502486 (-) False LOC120559199
XM_039799566.1 mRNA upstream 897 17547203 ~ 17572201 (-) False dnah12
XM_039799565.1 mRNA upstream 897 17547203 ~ 17572201 (-) True dnah12
XM_039799567.1 mRNA upstream 897 17547203 ~ 17568079 (-) False dnah12
XM_039802019.1 mRNA upstream 68129 17614435 ~ 17616207 (-) True bhlhe23
XM_039799336.1 mRNA upstream 125355 17671661 ~ 17682357 (-) False LOC120558364
TU67071 other downstream 1259216 16281044 ~ 16283856 (-) True G50217
TU66613 other downstream 2689255 14845338 ~ 14853817 (-) False G49845
TU66615 other downstream 2689255 14845338 ~ 14853817 (-) False G49845
TU66513 other downstream 3008467 14532124 ~ 14534605 (-) True G49766
XR_005639168.1 other downstream 3397850 14140380 ~ 14145222 (-) False LOC120558710
TU67800 other upstream 141809 17688115 ~ 17689760 (-) True G50712
XR_005639183.1 other upstream 293238 17839544 ~ 17886333 (-) False zbtb46
TU68271 other upstream 1334059 18880365 ~ 18886753 (-) False LOC120558627
XR_005639384.1 other upstream 2153467 19699773 ~ 19699894 (-) True LOC120559929
XR_005639383.1 other upstream 2155024 19701330 ~ 19701451 (-) True LOC120559928

Expression Profile