Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039799629.1 |
| length | 1223 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | LOC120558584 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 13243174 ~ 13249562 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65973 | lncRNA | downstream | 23521 | 13206367 ~ 13221242 (-) | False | camta1a |
| TU65959 | lncRNA | downstream | 320435 | 12921001 ~ 12924328 (-) | True | G49407 |
| TU65931 | lncRNA | downstream | 405631 | 12837520 ~ 12839132 (-) | True | G49384 |
| TU65921 | lncRNA | downstream | 465443 | 12775917 ~ 12779320 (-) | True | G49374 |
| TU65916 | lncRNA | downstream | 473344 | 12768820 ~ 12771419 (-) | True | G49372 |
| TU66015 | lncRNA | upstream | 32425 | 13281987 ~ 13284250 (-) | True | G49447 |
| TU66052 | lncRNA | upstream | 58955 | 13308517 ~ 13310312 (-) | False | LOC120558437 |
| TU66059 | lncRNA | upstream | 58955 | 13308517 ~ 13312729 (-) | False | LOC120558437 |
| TU66061 | lncRNA | upstream | 58955 | 13308517 ~ 13311160 (-) | True | LOC120558437 |
| XR_005639127.1 | lncRNA | upstream | 105555 | 13355117 ~ 13357805 (-) | True | LOC120558463 |
| XM_039799633.1 | mRNA | downstream | 7653 | 13236216 ~ 13237110 (-) | True | dhfr |
| XM_039799528.1 | mRNA | downstream | 23425 | 12924458 ~ 13221338 (-) | True | camta1a |
| XM_039799524.1 | mRNA | downstream | 330492 | 12896793 ~ 12914271 (-) | False | ccdc187 |
| XM_039799634.1 | mRNA | upstream | 1424 | 13250986 ~ 13253608 (-) | True | LOC120558587 |
| XM_039799635.1 | mRNA | upstream | 9763 | 13259325 ~ 13262798 (-) | True | mfsd4ab |
| XM_039801959.1 | mRNA | upstream | 42952 | 13292514 ~ 13299992 (-) | True | LOC120559884 |
| XM_039801960.1 | mRNA | upstream | 42952 | 13292514 ~ 13296393 (-) | False | LOC120559884 |
| XM_039801961.1 | mRNA | upstream | 42952 | 13292514 ~ 13295760 (-) | False | LOC120559884 |
| TU65695 | other | downstream | 806038 | 12419786 ~ 12438725 (-) | False | prickle3 |
| TU65659 | other | downstream | 853092 | 12388981 ~ 12391671 (-) | True | fkbp1aa |
| TU65587 | other | downstream | 1021761 | 12220737 ~ 12223002 (-) | False | ppdpfa |
| XR_005639172.1 | other | downstream | 1075554 | 12149794 ~ 12169209 (-) | False | dnmt3ba |
| TU65529 | other | downstream | 1116338 | 12126886 ~ 12128425 (-) | True | G49083 |
| TU66001 | other | upstream | 2850 | 13252412 ~ 13253472 (-) | False | LOC120558587 |
| XR_005639168.1 | other | upstream | 890818 | 14140380 ~ 14145222 (-) | False | LOC120558710 |
| TU66513 | other | upstream | 1282562 | 14532124 ~ 14534605 (-) | True | G49766 |
| TU66613 | other | upstream | 1595776 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU66615 | other | upstream | 1595776 | 14845338 ~ 14853817 (-) | False | G49845 |
