Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039800262.1 |
| length | 1189 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | ccdc115 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 20317192 ~ 20321532 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68847 | lncRNA | downstream | 16526 | 20299051 ~ 20300666 (-) | True | G51518 |
| TU68779 | lncRNA | downstream | 243599 | 20065862 ~ 20073593 (-) | False | G51467 |
| TU68775 | lncRNA | downstream | 244361 | 20065862 ~ 20072831 (-) | False | G51467 |
| TU68777 | lncRNA | downstream | 244361 | 20065862 ~ 20072831 (-) | True | G51467 |
| TU68785 | lncRNA | downstream | 253656 | 20063108 ~ 20063536 (-) | True | G51468 |
| XR_005639206.1 | lncRNA | upstream | 46454 | 20367986 ~ 20382875 (-) | True | LOC120558923 |
| XR_005639207.1 | lncRNA | upstream | 46464 | 20367996 ~ 20382875 (-) | False | LOC120558923 |
| TU68877 | lncRNA | upstream | 119964 | 20441496 ~ 20441807 (-) | True | G51544 |
| TU68904 | lncRNA | upstream | 340821 | 20662353 ~ 20663577 (-) | True | LOC120558476 |
| XR_005639129.1 | lncRNA | upstream | 340896 | 20662428 ~ 20663576 (-) | False | LOC120558476 |
| XM_039800215.1 | mRNA | downstream | 1170 | 20311426 ~ 20316022 (-) | True | si:dkey-109j17.5 |
| XM_039800254.1 | mRNA | downstream | 7726 | 20306440 ~ 20309466 (-) | True | apobec2b |
| XM_039800268.1 | mRNA | downstream | 148301 | 20158654 ~ 20168891 (-) | False | csrp1a |
| XM_039800267.1 | mRNA | downstream | 148301 | 20158654 ~ 20168891 (-) | True | csrp1a |
| XM_039800276.1 | mRNA | downstream | 159833 | 20155393 ~ 20157359 (-) | True | phlda3 |
| XM_039800238.1 | mRNA | upstream | 3919 | 20325451 ~ 20328339 (-) | True | fkbpl |
| XM_039800269.1 | mRNA | upstream | 88005 | 20409537 ~ 20431731 (-) | True | LOC120558914 |
| XM_039800315.1 | mRNA | upstream | 408574 | 20730106 ~ 20740959 (-) | True | copz1 |
| XM_039800290.1 | mRNA | upstream | 430051 | 20751583 ~ 20754530 (-) | True | hnrnpa1b |
| XM_039801897.1 | mRNA | upstream | 478567 | 20800099 ~ 20808534 (-) | True | hoxc1a |
| XR_005639385.1 | other | downstream | 610392 | 19706679 ~ 19706800 (-) | True | LOC120559930 |
| XR_005639383.1 | other | downstream | 615741 | 19701330 ~ 19701451 (-) | True | LOC120559928 |
| XR_005639384.1 | other | downstream | 617298 | 19699773 ~ 19699894 (-) | True | LOC120559929 |
| TU68271 | other | downstream | 1430439 | 18880365 ~ 18886753 (-) | False | LOC120558627 |
| XR_005639183.1 | other | downstream | 2430859 | 17839544 ~ 17886333 (-) | False | zbtb46 |
| XR_005639106.1 | other | upstream | 551176 | 20872708 ~ 20952518 (-) | False | LOC120558386 |
| XR_005639105.1 | other | upstream | 562406 | 20883938 ~ 20952518 (-) | False | LOC120558386 |
| XR_005639108.1 | other | upstream | 562406 | 20883938 ~ 20952518 (-) | False | LOC120558386 |
| XR_005639104.1 | other | upstream | 562406 | 20883938 ~ 20952518 (-) | False | LOC120558386 |
| XR_005639110.1 | other | upstream | 562406 | 20883938 ~ 20952009 (-) | False | LOC120558386 |
