RNA id: XM_039800914.1


Basic Information

Item Value
RNA id XM_039800914.1
length 1328
RNA type mRNA
GC content 0.50
exon number 8
gene id taf8
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8662476 ~ 8674082 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACGACGACATAAATTCACACCATGTTTACTAATGGCGGCTAAAACGACCGTCGGAAAAATTACGTTTTTTCCATTATAGAGTTAAATTAGTTTACTCCAAAGAGCAGAGTacaaataatcacatatggCGGATCCTGTGGTTGCATCTAGAGGTTCACTGAATGAAGGAGGGCGTGGGAGTAGTGGTAAAGCAGCTACCAGTCCTGCAGAGAACTACCACCTGGCCCGACGTCGcaccctgcaggttgttgtcaGTGCCCTGCTGACAGAGTGTGGCTTCGAGAGCGCCGAGAAGGCAGCGGTGGAGACACTCACTGAGATGATGCAGAGCTATATAACTGAAATAGGTCGGTGTGCTAAAGCTTATTGTGAACACACAGCCAGAAGCGTCCCAACCCTGGCAGATACAGTGGTCACACTCATTGAAATGGGTTTCAATGCCGACACCCTGCCTGTGTATGCCAAGAGATCACAGAGGATGGTCATAACTGCCCCTCCAGTGACGAACGCACCTGTGACTCCCAAAGCACTGTCGGCCGGACAGAAACGCATACATCCGGCTTACATCCCCAGCCACTTCCCAGAGTTCCCTGACCCTCACACGTACATCAAGACACCTACATTCAGGGAGCCTGTGTCAGACTACCAAGTGGTGAGAGAGAAGGCAGCAAGTCAGAAGAGAGACGTGGAGCGAGCGCTCACACGCTTCATGGCCAAGACGGGAGAAACTCAGAGCCTCTTCAAAGACGACATCACTGCCTTCCCATTGATCGCAGCACAACCAAGCAGCATCCCATATCTCAGTGCCCTCCTGCCCTCGGAGCTGGAATTGCAGACTCTGGAGGAGACGGACTCCTCGGAGCAGGACgaccagacagacagtgagaacGCAGCAGGAAACCTCATCAATGATGATCCAGGAGGTGACAAAGAGAACTCCATGCTTCCTCCCAGCAGCGTCGTTCCCTCCGCTAAGGCTAGCGAGGACAACGTGATCGACAACCCGTACCTTCGGCCGGTCAAGAAACCCAAAGTGAGGAGGAAGAAATGAAACCAATATGAgccaacagacacacacttgcCACAGTGGTTGGTGCTTCCAGCAGTGCAGCGATTCCCTccccagagaggagagaggcacGGCGGTGAAGCGTCCCGGACCAGCGCCGCTGTTGGTATTTTGTATATTGACAGACTTCTTTTGAAGAgacaacttattttttttttgttgcgttACTTTTCAGCAAGCACTAACTTTGTAAAAACATGGTGAAATCACAGTCATTTTGTGAATAAAGATAAattacttgtttgttttttactcttgA

Function

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64266 lncRNA downstream 8157 8611698 ~ 8654319 (-) False G48128
TU64267 lncRNA downstream 8157 8611698 ~ 8654319 (-) True G48128
TU64146 lncRNA downstream 280375 8381117 ~ 8382101 (-) False ada
TU64117 lncRNA downstream 328955 8330117 ~ 8333521 (-) True G48010
TU64097 lncRNA downstream 366008 8285262 ~ 8296468 (-) True LOC120559498
TU64292 lncRNA upstream 30309 8704391 ~ 8704711 (-) False LOC120559289
TU64295 lncRNA upstream 33458 8707540 ~ 8707965 (-) True G48153
XR_005639096.1 lncRNA upstream 69253 8743335 ~ 8746512 (-) True LOC120558360
TU64434 lncRNA upstream 402993 9077075 ~ 9088743 (-) True G48255
TU64476 lncRNA upstream 536842 9210924 ~ 9212825 (-) True G48285
XM_039800908.1 mRNA downstream 18925 8633055 ~ 8643551 (-) True gdi1
XM_039800902.1 mRNA downstream 84700 8572679 ~ 8577776 (-) True LOC120559283
XM_039801740.1 mRNA downstream 252742 8381779 ~ 8409734 (-) True ada
XM_039800967.1 mRNA downstream 406510 8252178 ~ 8255966 (-) True fitm2
XM_039800409.1 mRNA downstream 444595 8188068 ~ 8217881 (-) True jph2
XM_039800918.1 mRNA upstream 2035 8676117 ~ 8677135 (-) True g0s2
XM_039799713.1 mRNA upstream 8549 8682631 ~ 8700177 (-) True camk1gb
XM_039800911.1 mRNA upstream 28883 8702965 ~ 8705483 (-) True LOC120559289
XM_039799324.1 mRNA upstream 42678 8716760 ~ 8743028 (-) False mical1
XM_039799323.1 mRNA upstream 42678 8716760 ~ 8743028 (-) False mical1
TU64005 other downstream 474925 7771936 ~ 8187551 (-) True G47934
XR_005639386.1 other downstream 556281 8106061 ~ 8106195 (-) True LOC120559931
TU64023 other downstream 775626 7815151 ~ 7886850 (-) True G47937
TU63850 other downstream 1163674 7485427 ~ 7498802 (-) True G47814
TU63848 other downstream 1175416 7485427 ~ 7487060 (-) False G47814
TU64676 other upstream 1016448 9690530 ~ 9698107 (-) False olfml3a
TU64679 other upstream 1034249 9708331 ~ 9724134 (-) False olfml3a
TU64778 other upstream 1350912 10024994 ~ 10025825 (-) True G48523
TU65038 other upstream 1968637 10642719 ~ 10654818 (-) True G48697
TU65448 other upstream 3214859 11888941 ~ 11891046 (-) False srxn1

Expression Profile