Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039800933.1 |
| length | 1234 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | taf11 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 14228370 ~ 14230406 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| id | description |
|---|---|
| K03135 | TAF11; transcription initiation factor TFIID subunit 11 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66378 | lncRNA | downstream | 7752 | 14220217 ~ 14220618 (-) | True | G49682 |
| TU66377 | lncRNA | downstream | 8590 | 14219510 ~ 14219780 (-) | True | G49681 |
| TU66376 | lncRNA | downstream | 9191 | 14218972 ~ 14219179 (-) | True | G49680 |
| TU66375 | lncRNA | downstream | 9563 | 14217647 ~ 14218807 (-) | True | G49679 |
| TU66374 | lncRNA | downstream | 10860 | 14217020 ~ 14217510 (-) | True | G49678 |
| TU66415 | lncRNA | upstream | 169609 | 14400015 ~ 14402630 (-) | True | G49716 |
| TU66442 | lncRNA | upstream | 172304 | 14402710 ~ 14403787 (-) | True | G49739 |
| TU66447 | lncRNA | upstream | 185985 | 14416391 ~ 14425615 (-) | True | LOC120558545 |
| TU66514 | lncRNA | upstream | 309424 | 14539830 ~ 14544632 (-) | False | map3k12 |
| TU66554 | lncRNA | upstream | 439047 | 14669453 ~ 14672001 (-) | True | G49801 |
| XM_039801596.1 | mRNA | downstream | 24410 | 14195482 ~ 14203960 (-) | True | LOC120559681 |
| XM_039801595.1 | mRNA | downstream | 24410 | 14199459 ~ 14203960 (-) | False | LOC120559681 |
| XM_039799869.1 | mRNA | downstream | 35034 | 14185309 ~ 14193336 (-) | True | LOC120558709 |
| XM_039799871.1 | mRNA | downstream | 85876 | 14140380 ~ 14142494 (-) | True | LOC120558710 |
| XM_039799863.1 | mRNA | downstream | 102547 | 14122480 ~ 14125823 (-) | False | smim29 |
| XM_039801022.1 | mRNA | upstream | 173612 | 14404018 ~ 14409405 (-) | True | si:ch73-217n20.1 |
| XM_039799588.1 | mRNA | upstream | 185930 | 14416336 ~ 14432994 (-) | False | LOC120558545 |
| XM_039799587.1 | mRNA | upstream | 185930 | 14416336 ~ 14432994 (-) | False | LOC120558545 |
| XM_039799586.1 | mRNA | upstream | 185930 | 14416336 ~ 14432994 (-) | False | LOC120558545 |
| XM_039799581.1 | mRNA | upstream | 204839 | 14435245 ~ 14517114 (-) | False | dlgap4a |
| XR_005639168.1 | other | downstream | 83148 | 14140380 ~ 14145222 (-) | False | LOC120558710 |
| TU66001 | other | downstream | 974898 | 13252412 ~ 13253472 (-) | False | LOC120558587 |
| TU65695 | other | downstream | 1789645 | 12419786 ~ 12438725 (-) | False | prickle3 |
| TU65659 | other | downstream | 1836699 | 12388981 ~ 12391671 (-) | True | fkbp1aa |
| TU65587 | other | downstream | 2005368 | 12220737 ~ 12223002 (-) | False | ppdpfa |
| TU66513 | other | upstream | 301718 | 14532124 ~ 14534605 (-) | True | G49766 |
| TU66613 | other | upstream | 614932 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU66615 | other | upstream | 614932 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU67071 | other | upstream | 2050638 | 16281044 ~ 16283856 (-) | True | G50217 |
| TU67800 | other | upstream | 3457709 | 17688115 ~ 17689760 (-) | True | G50712 |
