Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039801763.1 |
| length | 1243 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 10 |
| gene id | hm13 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 40430115 ~ 40451414 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0043523 | regulation of neuron apoptotic process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004190 | aspartic-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K09595 | HM13; minor histocompatibility antigen H13 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU76313 | lncRNA | upstream | 38900 | 40390374 ~ 40391215 (+) | True | G56862 |
| TU76303 | lncRNA | upstream | 50835 | 40293712 ~ 40379280 (+) | True | G56853 |
| TU76309 | lncRNA | upstream | 59314 | 40370183 ~ 40370801 (+) | True | G56858 |
| TU76260 | lncRNA | upstream | 115858 | 40156647 ~ 40314257 (+) | False | G56832 |
| TU76255 | lncRNA | upstream | 115858 | 40212694 ~ 40314257 (+) | True | G56832 |
| TU76298 | lncRNA | downstream | 1533 | 40452947 ~ 40574799 (+) | True | G56849 |
| TU76325 | lncRNA | downstream | 41735 | 40493149 ~ 40535009 (+) | True | G56871 |
| XR_005639241.1 | lncRNA | downstream | 56283 | 40507697 ~ 40510459 (+) | True | LOC120559366 |
| TU76294 | lncRNA | downstream | 71357 | 40522771 ~ 40524538 (+) | True | G56848 |
| TU76296 | lncRNA | downstream | 71357 | 40522771 ~ 40524538 (+) | False | G56848 |
| XM_039799938.1 | mRNA | upstream | 11411 | 39417332 ~ 40418704 (+) | True | kcnd1 |
| XM_039799940.1 | mRNA | upstream | 243959 | 40160007 ~ 40186156 (+) | False | ptpn18 |
| XM_039799941.1 | mRNA | upstream | 243959 | 40160010 ~ 40186156 (+) | True | ptpn18 |
| XM_039799447.1 | mRNA | upstream | 511602 | 39905690 ~ 39918513 (+) | True | LOC120558439 |
| XM_039799944.1 | mRNA | upstream | 532629 | 39895965 ~ 39897486 (+) | True | LOC120558740 |
| XM_039801778.1 | mRNA | downstream | 13137 | 40464551 ~ 40464926 (+) | True | LOC120559775 |
| XM_039801429.1 | mRNA | downstream | 17869 | 40469283 ~ 40469564 (+) | True | LOC120559596 |
| XM_039800489.1 | mRNA | downstream | 45435 | 40496849 ~ 40515023 (+) | True | LOC120559068 |
| XM_039801037.1 | mRNA | downstream | 221617 | 40673031 ~ 40691622 (+) | True | LOC120559371 |
| XM_039801039.1 | mRNA | downstream | 253904 | 40705318 ~ 40710077 (+) | True | LOC120559372 |
| TU76217 | other | upstream | 281495 | 40102385 ~ 40148620 (+) | True | G56818 |
| TU76220 | other | upstream | 318827 | 40110458 ~ 40111288 (+) | True | G56819 |
| TU76202 | other | upstream | 412800 | 40016985 ~ 40017315 (+) | True | G56807 |
| TU75149 | other | upstream | 511752 | 39808857 ~ 39918363 (+) | True | G56127 |
| TU75108 | other | upstream | 874128 | 39531633 ~ 39555987 (+) | True | G56112 |
| TU76286 | other | downstream | 4695 | 40456109 ~ 40457175 (+) | True | G56847 |
| TU76475 | other | downstream | 649180 | 41100594 ~ 41102972 (+) | False | LOC120559073 |
| TU76436 | other | downstream | 669861 | 41121275 ~ 41129376 (+) | True | G56947 |
| TU77125 | other | downstream | 2020506 | 42471920 ~ 42473941 (+) | False | LOC120558567 |
| TU77616 | other | downstream | 2926932 | 43378346 ~ 43385991 (+) | True | zgc:113363 |
