Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039801808.1 |
| length | 1294 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | tnnc1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 15863022 ~ 15867186 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K05865 | TNNC1; troponin C, slow skeletal and cardiac muscles |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66923 | lncRNA | downstream | 174595 | 15685011 ~ 15688427 (-) | True | G50104 |
| TU66918 | lncRNA | downstream | 197914 | 15664770 ~ 15665108 (-) | True | G50101 |
| TU66805 | lncRNA | downstream | 541101 | 15321709 ~ 15321921 (-) | True | G50006 |
| TU66804 | lncRNA | downstream | 543177 | 15319406 ~ 15319845 (-) | True | G50005 |
| TU66803 | lncRNA | downstream | 560385 | 15302398 ~ 15302637 (-) | True | G50004 |
| TU66970 | lncRNA | upstream | 12148 | 15879334 ~ 15896000 (-) | True | G50136 |
| TU66972 | lncRNA | upstream | 19704 | 15886890 ~ 15890117 (-) | True | G50138 |
| TU66991 | lncRNA | upstream | 62935 | 15930121 ~ 15933298 (-) | True | G50153 |
| TU66980 | lncRNA | upstream | 85344 | 15952530 ~ 15956672 (-) | True | G50143 |
| TU67119 | lncRNA | upstream | 419135 | 16286321 ~ 16379623 (-) | False | G50230 |
| XM_039801848.1 | mRNA | downstream | 39216 | 15799940 ~ 15823806 (-) | True | bmp7b |
| XM_039801223.1 | mRNA | downstream | 64533 | 15792178 ~ 15798489 (-) | False | irf10 |
| XM_039801222.1 | mRNA | downstream | 64533 | 15792178 ~ 15798489 (-) | True | irf10 |
| XM_039801935.1 | mRNA | downstream | 105814 | 15741216 ~ 15757208 (-) | False | LOC120559871 |
| XM_039801934.1 | mRNA | downstream | 105814 | 15741216 ~ 15757208 (-) | True | LOC120559871 |
| XM_039801509.1 | mRNA | upstream | 43412 | 15910598 ~ 15920543 (-) | True | vgll4a |
| XM_039801503.1 | mRNA | upstream | 70643 | 15937829 ~ 15951030 (-) | False | raf1a |
| XM_039801501.1 | mRNA | upstream | 70643 | 15937829 ~ 15950232 (-) | True | raf1a |
| XM_039801505.1 | mRNA | upstream | 70643 | 15937829 ~ 15950230 (-) | False | raf1a |
| XM_039801504.1 | mRNA | upstream | 71694 | 15938880 ~ 15950232 (-) | False | raf1a |
| TU66613 | other | downstream | 1009205 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU66615 | other | downstream | 1009205 | 14845338 ~ 14853817 (-) | False | G49845 |
| TU66513 | other | downstream | 1328417 | 14532124 ~ 14534605 (-) | True | G49766 |
| XR_005639168.1 | other | downstream | 1717800 | 14140380 ~ 14145222 (-) | False | LOC120558710 |
| TU66001 | other | downstream | 2609550 | 13252412 ~ 13253472 (-) | False | LOC120558587 |
| TU67071 | other | upstream | 413858 | 16281044 ~ 16283856 (-) | True | G50217 |
| TU67800 | other | upstream | 1820929 | 17688115 ~ 17689760 (-) | True | G50712 |
| XR_005639183.1 | other | upstream | 1972358 | 17839544 ~ 17886333 (-) | False | zbtb46 |
| TU68271 | other | upstream | 3013179 | 18880365 ~ 18886753 (-) | False | LOC120558627 |
| XR_005639384.1 | other | upstream | 3832587 | 19699773 ~ 19699894 (-) | True | LOC120559929 |
