Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005639383.1 |
| length | 122 |
| RNA type | snoRNA |
| GC content | 0.50 |
| exon number | 1 |
| gene id | LOC120559928 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 19701330 ~ 19701451 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko03013 | Nucleocytoplasmic transport |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68468 | lncRNA | downstream | 103822 | 19595594 ~ 19597508 (-) | True | G51236 |
| TU68459 | lncRNA | downstream | 241925 | 19456652 ~ 19459405 (-) | True | G51228 |
| TU68349 | lncRNA | downstream | 286135 | 19327652 ~ 19415195 (-) | True | G51147 |
| TU68313 | lncRNA | downstream | 473425 | 19227321 ~ 19227905 (-) | True | G51122 |
| TU68282 | lncRNA | downstream | 750894 | 18948833 ~ 18950436 (-) | False | kcnd3 |
| TU68493 | lncRNA | upstream | 97754 | 19799205 ~ 19805539 (-) | True | LOC120558911 |
| TU68516 | lncRNA | upstream | 123960 | 19825411 ~ 19850660 (-) | True | G51266 |
| TU68785 | lncRNA | upstream | 361657 | 20063108 ~ 20063536 (-) | True | G51468 |
| TU68775 | lncRNA | upstream | 364411 | 20065862 ~ 20072831 (-) | False | G51467 |
| TU68777 | lncRNA | upstream | 364411 | 20065862 ~ 20072831 (-) | True | G51467 |
| XM_039800221.1 | mRNA | downstream | 3789 | 19689551 ~ 19697541 (-) | False | arhgef3l |
| XM_039800222.1 | mRNA | downstream | 4518 | 19689551 ~ 19696812 (-) | True | arhgef3l |
| XM_039800233.1 | mRNA | downstream | 11970 | 19684047 ~ 19689360 (-) | True | usp21 |
| XM_039800234.1 | mRNA | downstream | 11972 | 19684047 ~ 19689358 (-) | False | usp21 |
| XM_039800270.1 | mRNA | downstream | 17383 | 19679491 ~ 19683947 (-) | True | LOC120558915 |
| XM_039800212.1 | mRNA | upstream | 15317 | 19716768 ~ 19753439 (-) | False | camkvl |
| XM_039800211.1 | mRNA | upstream | 15317 | 19716768 ~ 19753439 (-) | True | camkvl |
| XM_039800264.1 | mRNA | upstream | 101415 | 19802866 ~ 19815318 (-) | False | LOC120558911 |
| XM_039800263.1 | mRNA | upstream | 101415 | 19802866 ~ 19815316 (-) | False | LOC120558911 |
| XM_039800277.1 | mRNA | upstream | 121192 | 19822643 ~ 19823653 (-) | True | ngfa |
| XR_005639384.1 | other | downstream | 1436 | 19699773 ~ 19699894 (-) | True | LOC120559929 |
| TU68271 | other | downstream | 814577 | 18880365 ~ 18886753 (-) | False | LOC120558627 |
| XR_005639183.1 | other | downstream | 1814997 | 17839544 ~ 17886333 (-) | False | zbtb46 |
| TU67800 | other | downstream | 2011570 | 17688115 ~ 17689760 (-) | True | G50712 |
| TU67071 | other | downstream | 3417474 | 16281044 ~ 16283856 (-) | True | G50217 |
| XR_005639385.1 | other | upstream | 5228 | 19706679 ~ 19706800 (-) | True | LOC120559930 |
| unassigned_transcript_227 | other | upstream | 619316 | 20320767 ~ 20320838 (-) | True | trnae-uuc_54 |
| XR_005639106.1 | other | upstream | 1171257 | 20872708 ~ 20952518 (-) | False | LOC120558386 |
| XR_005639105.1 | other | upstream | 1182487 | 20883938 ~ 20952518 (-) | False | LOC120558386 |
| XR_005639108.1 | other | upstream | 1182487 | 20883938 ~ 20952518 (-) | False | LOC120558386 |
