RNA id: TU81262



Basic Information


Item Value
RNA id TU81262
length 279
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G60577
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 10770546 ~ 10770824 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atggagagaggacagagagagagaaaagagagagaaacagggagagaaagaaaagacaaacagagagatagagagggagggagaaggcgggatgtagaaagaaggagagagagagaaatctgtaagaagaagttgaaatagtggaaatcgttaaaaagttggctttaaaagctgaaaaatgacaaaatatgtagaacattgtgaagtctttagctgaagctgaagaatagttgaaaaagtggaaattggttcaataagttaaagaaagtaagagaggga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81260 lncRNA upstream 27660 10742652 ~ 10742886 (+) True G60575
TU81259 lncRNA upstream 34366 10735721 ~ 10736180 (+) True G60574
TU81251 lncRNA upstream 65853 10686683 ~ 10704693 (+) True G60566
XR_005639494.1 lncRNA upstream 67112 10702631 ~ 10703434 (+) True LOC120560597
XR_005639493.1 lncRNA upstream 68029 10701819 ~ 10702517 (+) True LOC120560596
TU81296 lncRNA downstream 41955 10812779 ~ 10814069 (+) False G60607
TU81298 lncRNA downstream 41955 10812779 ~ 10852906 (+) True G60607
TU81299 lncRNA downstream 43739 10814563 ~ 10840317 (+) True G60608
TU81312 lncRNA downstream 131237 10902061 ~ 10905629 (+) True G60620
TU81388 lncRNA downstream 348953 11119777 ~ 11120044 (+) True G60682
XM_039804113.1 mRNA upstream 18106 10748117 ~ 10752440 (+) False LOC120561144
XM_039804112.1 mRNA upstream 23593 10726438 ~ 10746953 (+) True LOC120561142
XM_039804111.1 mRNA upstream 23593 10726439 ~ 10746953 (+) False LOC120561142
XM_039803877.1 mRNA upstream 789492 9927049 ~ 9981054 (+) False LOC120560959
XM_039803878.1 mRNA upstream 789492 9927049 ~ 9981054 (+) False LOC120560959
XM_039802043.1 mRNA downstream 402195 11173019 ~ 11188211 (+) False marveld2b
XM_039802044.1 mRNA downstream 402250 11173074 ~ 11188211 (+) False marveld2b
XM_039802042.1 mRNA downstream 402963 11173787 ~ 11188211 (+) True marveld2b
XM_039804537.1 mRNA downstream 422663 11193487 ~ 11206112 (+) True oclnb
XM_039804538.1 mRNA downstream 422718 11193542 ~ 11206112 (+) False oclnb
XR_005639564.1 other upstream 18106 10748116 ~ 10752440 (+) True LOC120561144
XR_005639563.1 other upstream 18106 10748116 ~ 10752440 (+) False LOC120561144
XR_005639565.1 other upstream 18106 10748116 ~ 10752440 (+) False LOC120561144
XR_005639562.1 other upstream 23598 10726446 ~ 10746948 (+) False LOC120561142
XR_005639542.1 other upstream 789492 9927049 ~ 9981054 (+) True LOC120560959
TU81647 other downstream 1155359 11926183 ~ 11926601 (+) True G60897
TU81938 other downstream 2150323 12921147 ~ 12923836 (+) False G61139
TU81939 other downstream 2150323 12921147 ~ 12923836 (+) True G61139
TU82171 other downstream 3336659 14107483 ~ 14109546 (+) True G61337
TU82172 other downstream 3370618 14141442 ~ 14142050 (+) True G61338

Expression Profile