RNA id: TU89494


Basic Information

Item Value
RNA id TU89494
length 201
lncRNA type inter_gene
GC content 0.48
exon number 3
gene id G66907
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35000278 ~ 35002196 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtggtacgtgtgtgtatgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtctgtgtgtgtgtgtgtatgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89403 lncRNA upstream 135588 34861499 ~ 34864690 (+) True G66832
TU89406 lncRNA upstream 170624 34828892 ~ 34829654 (+) True G66834
TU89399 lncRNA upstream 183951 34815589 ~ 34816327 (+) True G66830
TU89323 lncRNA upstream 490665 34508142 ~ 34509613 (+) True G66769
TU89226 lncRNA upstream 513527 34486538 ~ 34486751 (+) True G66695
XR_005639572.1 lncRNA downstream 253465 35255661 ~ 35258072 (+) True LOC120561203
TU89602 lncRNA downstream 386580 35388776 ~ 35406557 (+) False G66997
TU89604 lncRNA downstream 403699 35405895 ~ 35417807 (+) True G66997
TU89791 lncRNA downstream 869227 35871423 ~ 35993376 (+) False G67152
TU89792 lncRNA downstream 869227 35871423 ~ 35877725 (+) False G67152
XM_039804036.1 mRNA upstream 47801 34951502 ~ 34952477 (+) True LOC120561072
XM_039804035.1 mRNA upstream 104649 34885538 ~ 34895629 (+) True LOC120561071
XM_039802045.1 mRNA upstream 185783 34809084 ~ 34814495 (+) True tor2a
XM_039802732.1 mRNA upstream 194331 34774749 ~ 34805947 (+) False sh2d3cb
XM_039802731.1 mRNA upstream 194331 34781399 ~ 34805947 (+) True sh2d3cb
XM_039804547.1 mRNA downstream 44648 35046844 ~ 35059631 (+) True LOC120561428
XM_039804548.1 mRNA downstream 44648 35046844 ~ 35059631 (+) False LOC120561428
XM_039804549.1 mRNA downstream 44648 35046844 ~ 35059631 (+) False LOC120561428
XM_039804550.1 mRNA downstream 47105 35049301 ~ 35059631 (+) False LOC120561428
XM_039803990.1 mRNA downstream 123363 35125559 ~ 35131747 (+) False mymk
TU89401 other upstream 136012 34861499 ~ 34864266 (+) False G66832
TU89402 other upstream 136012 34861499 ~ 34864266 (+) False G66832
TU89404 other upstream 136012 34861499 ~ 34864266 (+) False G66832
TU89395 other upstream 226578 34765946 ~ 34773700 (+) False LOC120561070
XR_005639528.1 other upstream 472873 34514010 ~ 34527405 (+) False cfap157
TU89504 other downstream 44659 35046855 ~ 35059618 (+) False LOC120561428
XR_005639497.1 other downstream 520469 35522665 ~ 35547463 (+) False LOC120560625
TU89783 other downstream 838678 35840874 ~ 35852056 (+) True G67146
TU89780 other downstream 839338 35841534 ~ 35854161 (+) False G67145
TU89779 other downstream 839882 35842078 ~ 35854161 (+) True G67145

Expression Profile