Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034304299.1 |
| length | 881 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | nms |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 195031 ~ 201012 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578168.1 | lncRNA | downstream | 110716 | 83870 ~ 85921 (-) | False | LOC117597330 |
| TU88992 | lncRNA | downstream | 110751 | 84571 ~ 85886 (-) | True | LOC117597330 |
| TU88997 | lncRNA | downstream | 133349 | 62798 ~ 63288 (-) | True | G75037 |
| TU88745 | lncRNA | downstream | 150768 | 44484 ~ 45869 (-) | True | G74827 |
| TU88739 | lncRNA | downstream | 161194 | 35050 ~ 35443 (-) | True | G74822 |
| TU88996 | lncRNA | upstream | 128931 | 329943 ~ 330490 (-) | False | LOC113524562 |
| TU89138 | lncRNA | upstream | 171598 | 372610 ~ 374644 (-) | False | LOC113524348 |
| TU89152 | lncRNA | upstream | 215725 | 416737 ~ 417747 (-) | True | G75183 |
| TU89173 | lncRNA | upstream | 230507 | 431519 ~ 434836 (-) | True | G75195 |
| TU89179 | lncRNA | upstream | 280056 | 481068 ~ 481964 (-) | True | G75201 |
| XM_034304260.1 | mRNA | downstream | 22278 | 164750 ~ 174359 (-) | True | LOC113524366 |
| XM_034304300.1 | mRNA | downstream | 40358 | 136834 ~ 156279 (-) | True | LOC113524367 |
| XM_034304295.1 | mRNA | downstream | 55344 | 138938 ~ 141293 (-) | True | LOC117597326 |
| XM_026910582.2 | mRNA | downstream | 71097 | 112179 ~ 125540 (-) | True | LOC113524368 |
| XM_034304275.1 | mRNA | downstream | 90557 | 96183 ~ 106080 (-) | False | LOC113524326 |
| XM_034304279.1 | mRNA | upstream | 31563 | 232575 ~ 257446 (-) | True | edar |
| XM_034304265.1 | mRNA | upstream | 121234 | 322246 ~ 354602 (-) | False | LOC113524317 |
| XM_034304266.1 | mRNA | upstream | 122451 | 323463 ~ 330401 (-) | True | LOC113524562 |
| XM_034304262.1 | mRNA | upstream | 138577 | 339589 ~ 354605 (-) | True | LOC113524317 |
| XM_026910514.2 | mRNA | upstream | 138577 | 339589 ~ 354602 (-) | False | LOC113524317 |
| TU89040 | other | downstream | 34060 | 162214 ~ 162577 (-) | True | G75076 |
| TU88741 | other | downstream | 152291 | 43731 ~ 44346 (-) | True | G74824 |
| TU88709 | other | downstream | 164598 | 18934 ~ 32039 (-) | True | G74815 |
| XR_004578164.1 | other | upstream | 657392 | 858404 ~ 864607 (-) | False | sox21b |
| TU89432 | other | upstream | 661016 | 862028 ~ 864494 (-) | False | sox21b |
| XR_003402538.2 | other | upstream | 737000 | 938012 ~ 938203 (-) | True | LOC113524372 |
| TU89684 | other | upstream | 944285 | 1145297 ~ 1159269 (-) | True | rpl31 |
| XR_003402581.2 | other | upstream | 970869 | 1171881 ~ 1187499 (-) | False | lcp1 |
