Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89366 |
| length | 278 |
| lncRNA type | read_through |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G75348 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 796822 ~ 892057 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89394 | lncRNA | downstream | 24392 | 767361 ~ 772430 (-) | True | G75372 |
| TU89390 | lncRNA | downstream | 32267 | 764295 ~ 764555 (-) | True | G75369 |
| TU89388 | lncRNA | downstream | 33982 | 762640 ~ 762840 (-) | False | frmpd4 |
| TU89386 | lncRNA | downstream | 35984 | 760352 ~ 760838 (-) | True | G75365 |
| TU89374 | lncRNA | downstream | 76216 | 719505 ~ 720606 (-) | True | G75356 |
| TU89458 | lncRNA | upstream | 27839 | 919896 ~ 926094 (-) | True | LOC113524338 |
| TU89460 | lncRNA | upstream | 35802 | 927859 ~ 928966 (-) | True | G75429 |
| TU89459 | lncRNA | upstream | 37090 | 929147 ~ 929357 (-) | True | G75428 |
| TU89682 | lncRNA | upstream | 187866 | 1079923 ~ 1080355 (-) | True | G75599 |
| TU89683 | lncRNA | upstream | 189150 | 1081207 ~ 1081406 (-) | True | G75600 |
| XM_034304257.1 | mRNA | downstream | 30831 | 729592 ~ 765991 (-) | False | frmpd4 |
| XM_034304255.1 | mRNA | downstream | 33973 | 729592 ~ 762849 (-) | False | frmpd4 |
| XM_026910507.2 | mRNA | downstream | 38901 | 729592 ~ 757921 (-) | False | frmpd4 |
| XM_034304254.1 | mRNA | downstream | 38901 | 729592 ~ 757921 (-) | False | frmpd4 |
| XM_034304258.1 | mRNA | downstream | 39603 | 729592 ~ 757219 (-) | False | frmpd4 |
| XM_034304281.1 | mRNA | upstream | 28779 | 920836 ~ 936968 (-) | False | LOC113524338 |
| XM_026910548.2 | mRNA | upstream | 28779 | 920836 ~ 936968 (-) | False | LOC113524338 |
| XM_026910528.2 | mRNA | upstream | 52262 | 944319 ~ 957738 (-) | True | LOC113524324 |
| XM_026910536.2 | mRNA | upstream | 210983 | 1103040 ~ 1112551 (-) | True | LOC113524329 |
| XM_034304297.1 | mRNA | upstream | 263062 | 1155119 ~ 1159338 (-) | False | rpl31 |
| TU88975 | other | downstream | 596104 | 195031 ~ 200718 (-) | False | nms |
| TU88976 | other | downstream | 596497 | 195031 ~ 200325 (-) | True | nms |
| TU89040 | other | downstream | 634245 | 162214 ~ 162577 (-) | True | G75076 |
| TU88741 | other | downstream | 752476 | 43731 ~ 44346 (-) | True | G74824 |
| TU88709 | other | downstream | 764783 | 18934 ~ 32039 (-) | True | G74815 |
| XR_003402538.2 | other | upstream | 45955 | 938012 ~ 938203 (-) | True | LOC113524372 |
| TU89684 | other | upstream | 253240 | 1145297 ~ 1159269 (-) | True | rpl31 |
| XR_003402581.2 | other | upstream | 279824 | 1171881 ~ 1187499 (-) | False | lcp1 |
| trnas-uga_4 | other | upstream | 338252 | 1230309 ~ 1230390 (-) | True | trnas-uga_4 |
| trnal-cag_10 | other | upstream | 338530 | 1230587 ~ 1230669 (-) | True | trnal-cag_10 |
