Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89729 |
| length | 235 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G75640 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1169459 ~ 1169693 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89714 | lncRNA | downstream | 29256 | 1135626 ~ 1140203 (-) | True | G75628 |
| TU89683 | lncRNA | downstream | 88053 | 1081207 ~ 1081406 (-) | True | G75600 |
| TU89682 | lncRNA | downstream | 89104 | 1079923 ~ 1080355 (-) | True | G75599 |
| TU89459 | lncRNA | downstream | 240102 | 929147 ~ 929357 (-) | True | G75428 |
| TU89460 | lncRNA | downstream | 240493 | 927859 ~ 928966 (-) | True | G75429 |
| TU89722 | lncRNA | upstream | 39692 | 1209385 ~ 1215704 (-) | True | G75636 |
| TU89753 | lncRNA | upstream | 67528 | 1237221 ~ 1254096 (-) | True | G75663 |
| TU89783 | lncRNA | upstream | 136296 | 1305989 ~ 1306353 (-) | True | G75687 |
| TU89812 | lncRNA | upstream | 196689 | 1366382 ~ 1367066 (-) | True | G75713 |
| TU89818 | lncRNA | upstream | 205693 | 1375386 ~ 1377189 (-) | True | G75719 |
| XM_034304297.1 | mRNA | downstream | 10121 | 1155119 ~ 1159338 (-) | False | rpl31 |
| XM_034304298.1 | mRNA | downstream | 10262 | 1155119 ~ 1159197 (-) | False | rpl31 |
| XM_026910536.2 | mRNA | downstream | 56908 | 1103040 ~ 1112551 (-) | True | LOC113524329 |
| XM_026910528.2 | mRNA | downstream | 211721 | 944319 ~ 957738 (-) | True | LOC113524324 |
| XM_034304281.1 | mRNA | downstream | 232491 | 920836 ~ 936968 (-) | False | LOC113524338 |
| XM_026911023.2 | mRNA | upstream | 1016 | 1170709 ~ 1187499 (-) | True | lcp1 |
| XM_034304768.1 | mRNA | upstream | 101714 | 1271407 ~ 1282002 (-) | True | ints6 |
| XM_034304769.1 | mRNA | upstream | 101714 | 1271407 ~ 1281420 (-) | False | ints6 |
| XM_034304700.1 | mRNA | upstream | 137261 | 1306954 ~ 1315333 (-) | True | dhrs12 |
| XM_026911029.2 | mRNA | upstream | 137262 | 1306955 ~ 1315330 (-) | False | dhrs12 |
| TU89684 | other | downstream | 10190 | 1145297 ~ 1159269 (-) | True | rpl31 |
| XR_003402538.2 | other | downstream | 231256 | 938012 ~ 938203 (-) | True | LOC113524372 |
| XR_004578164.1 | other | downstream | 304852 | 858404 ~ 864607 (-) | False | sox21b |
| TU89432 | other | downstream | 304965 | 862028 ~ 864494 (-) | False | sox21b |
| TU88975 | other | downstream | 968741 | 195031 ~ 200718 (-) | False | nms |
| XR_003402581.2 | other | upstream | 2188 | 1171881 ~ 1187499 (-) | False | lcp1 |
| trnas-uga_4 | other | upstream | 60616 | 1230309 ~ 1230390 (-) | True | trnas-uga_4 |
| trnal-cag_10 | other | upstream | 60894 | 1230587 ~ 1230669 (-) | True | trnal-cag_10 |
| trnaw-cca | other | upstream | 83230 | 1252923 ~ 1252994 (-) | True | trnaw-cca |
| trnal-caa_1 | other | upstream | 88449 | 1258142 ~ 1258256 (-) | True | trnal-caa_1 |
