Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU89924 |
| length | 204 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 1 |
| gene id | htr2aa |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1591955 ~ 1596479 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89841 | lncRNA | downstream | 124172 | 1467662 ~ 1467899 (-) | True | G75740 |
| TU89840 | lncRNA | downstream | 136784 | 1454999 ~ 1455287 (-) | True | G75739 |
| TU89838 | lncRNA | downstream | 158844 | 1433022 ~ 1433227 (-) | True | G75737 |
| TU89837 | lncRNA | downstream | 177894 | 1413842 ~ 1414177 (-) | True | G75736 |
| TU89834 | lncRNA | downstream | 195549 | 1396297 ~ 1396522 (-) | True | G75734 |
| TU89942 | lncRNA | upstream | 64099 | 1656373 ~ 1656848 (-) | True | G75814 |
| TU90012 | lncRNA | upstream | 130307 | 1722581 ~ 1722799 (-) | True | G75875 |
| TU90038 | lncRNA | upstream | 208998 | 1801272 ~ 1819183 (-) | True | G75889 |
| TU90040 | lncRNA | upstream | 208998 | 1801272 ~ 1817910 (-) | False | G75889 |
| TU90045 | lncRNA | upstream | 210397 | 1802671 ~ 1805931 (-) | False | G75889 |
| XM_026911013.2 | mRNA | downstream | 25284 | 1554942 ~ 1566787 (-) | False | LOC113524666 |
| XM_034304412.1 | mRNA | downstream | 26679 | 1554942 ~ 1565392 (-) | True | LOC113524666 |
| XM_026911012.2 | mRNA | downstream | 39636 | 1529825 ~ 1552435 (-) | True | si:dkey-230p4.1 |
| XM_026910995.2 | mRNA | downstream | 187280 | 1396684 ~ 1404791 (-) | True | esd |
| XM_034304180.1 | mRNA | downstream | 252849 | 1320263 ~ 1339222 (-) | True | rubcnl |
| XM_026911002.2 | mRNA | upstream | 23626 | 1615900 ~ 1624049 (-) | True | med4 |
| XM_034304840.1 | mRNA | upstream | 130983 | 1723257 ~ 1747031 (-) | True | mlphb |
| XM_026919622.2 | mRNA | upstream | 265988 | 1858262 ~ 1871493 (-) | True | cops8 |
| XM_034304738.1 | mRNA | upstream | 269879 | 1862153 ~ 1863790 (-) | True | trim63b |
| XM_026947295.2 | mRNA | upstream | 357858 | 1950132 ~ 1986039 (-) | True | ranbp2 |
| trnal-caa_7 | other | downstream | 23214 | 1568745 ~ 1568857 (-) | True | trnal-caa_7 |
| TU89874 | other | downstream | 62558 | 1529070 ~ 1529513 (-) | True | G75770 |
| trnak-uuu_2 | other | downstream | 120510 | 1471489 ~ 1471561 (-) | True | trnak-uuu_2 |
| trnat-agu_4 | other | downstream | 143807 | 1448191 ~ 1448264 (-) | True | trnat-agu_4 |
| trnaw-cca_4 | other | downstream | 177332 | 1414668 ~ 1414739 (-) | True | trnaw-cca_4 |
| trnat-agu_6 | other | upstream | 46111 | 1638385 ~ 1638458 (-) | True | trnat-agu_6 |
| trnar-ucu_5 | other | upstream | 46489 | 1638763 ~ 1638852 (-) | True | trnar-ucu_5 |
| trnat-agu_7 | other | upstream | 57779 | 1650053 ~ 1650126 (-) | True | trnat-agu_7 |
| trnar-ucu_6 | other | upstream | 70246 | 1662520 ~ 1662609 (-) | True | trnar-ucu_6 |
| trnat-agu_8 | other | upstream | 81838 | 1674112 ~ 1674185 (-) | True | trnat-agu_8 |
