Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90012 |
| length | 219 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G75875 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1722581 ~ 1722799 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89942 | lncRNA | downstream | 65733 | 1656373 ~ 1656848 (-) | True | G75814 |
| TU89924 | lncRNA | downstream | 130307 | 1592071 ~ 1592274 (-) | False | htr2aa |
| TU89841 | lncRNA | downstream | 254682 | 1467662 ~ 1467899 (-) | True | G75740 |
| TU89840 | lncRNA | downstream | 267294 | 1454999 ~ 1455287 (-) | True | G75739 |
| TU89838 | lncRNA | downstream | 289354 | 1433022 ~ 1433227 (-) | True | G75737 |
| TU90038 | lncRNA | upstream | 78473 | 1801272 ~ 1819183 (-) | True | G75889 |
| TU90040 | lncRNA | upstream | 78473 | 1801272 ~ 1817910 (-) | False | G75889 |
| TU90045 | lncRNA | upstream | 79872 | 1802671 ~ 1805931 (-) | False | G75889 |
| TU90044 | lncRNA | upstream | 84826 | 1807625 ~ 1819183 (-) | False | G75889 |
| TU90034 | lncRNA | upstream | 88099 | 1810898 ~ 1813791 (-) | False | G75889 |
| XM_026911002.2 | mRNA | downstream | 98532 | 1615900 ~ 1624049 (-) | True | med4 |
| XM_026911019.2 | mRNA | downstream | 126102 | 1591955 ~ 1596479 (-) | True | htr2aa |
| XM_026911013.2 | mRNA | downstream | 155794 | 1554942 ~ 1566787 (-) | False | LOC113524666 |
| XM_034304412.1 | mRNA | downstream | 157189 | 1554942 ~ 1565392 (-) | True | LOC113524666 |
| XM_026911012.2 | mRNA | downstream | 170146 | 1529825 ~ 1552435 (-) | True | si:dkey-230p4.1 |
| XM_034304840.1 | mRNA | upstream | 458 | 1723257 ~ 1747031 (-) | True | mlphb |
| XM_026919622.2 | mRNA | upstream | 135463 | 1858262 ~ 1871493 (-) | True | cops8 |
| XM_034304738.1 | mRNA | upstream | 139354 | 1862153 ~ 1863790 (-) | True | trim63b |
| XM_026947295.2 | mRNA | upstream | 227333 | 1950132 ~ 1986039 (-) | True | ranbp2 |
| XM_026947297.2 | mRNA | upstream | 227333 | 1950132 ~ 1985889 (-) | False | ranbp2 |
| trnar-ucu_7 | other | downstream | 48008 | 1674484 ~ 1674573 (-) | True | trnar-ucu_7 |
| trnat-agu_8 | other | downstream | 48396 | 1674112 ~ 1674185 (-) | True | trnat-agu_8 |
| trnar-ucu_6 | other | downstream | 59972 | 1662520 ~ 1662609 (-) | True | trnar-ucu_6 |
| trnat-agu_7 | other | downstream | 72455 | 1650053 ~ 1650126 (-) | True | trnat-agu_7 |
| trnar-ucu_5 | other | downstream | 83729 | 1638763 ~ 1638852 (-) | True | trnar-ucu_5 |
| TU90050 | other | upstream | 75183 | 1797982 ~ 1803645 (-) | True | G75893 |
| TU90190 | other | upstream | 326224 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| XR_004578243.1 | other | upstream | 1080088 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | upstream | 1081749 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| trnas-cga | other | upstream | 1216522 | 2939321 ~ 2939402 (-) | True | trnas-cga |
