Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90045 |
| length | 645 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G75889 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1801272 ~ 1819183 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90012 | lncRNA | downstream | 79872 | 1722581 ~ 1722799 (-) | True | G75875 |
| TU89942 | lncRNA | downstream | 145823 | 1656373 ~ 1656848 (-) | True | G75814 |
| TU89924 | lncRNA | downstream | 210397 | 1592071 ~ 1592274 (-) | False | htr2aa |
| TU89841 | lncRNA | downstream | 334772 | 1467662 ~ 1467899 (-) | True | G75740 |
| TU89840 | lncRNA | downstream | 347384 | 1454999 ~ 1455287 (-) | True | G75739 |
| TU90044 | lncRNA | upstream | 1694 | 1807625 ~ 1819183 (-) | False | G75889 |
| TU90034 | lncRNA | upstream | 4967 | 1810898 ~ 1813791 (-) | False | G75889 |
| TU90039 | lncRNA | upstream | 4967 | 1810898 ~ 1819183 (-) | False | G75889 |
| TU90017 | lncRNA | upstream | 43306 | 1849237 ~ 1850224 (-) | True | G75880 |
| TU90018 | lncRNA | upstream | 43306 | 1849237 ~ 1873669 (-) | False | G75880 |
| XM_034304840.1 | mRNA | downstream | 55640 | 1723257 ~ 1747031 (-) | True | mlphb |
| XM_026911002.2 | mRNA | downstream | 178622 | 1615900 ~ 1624049 (-) | True | med4 |
| XM_026911019.2 | mRNA | downstream | 206192 | 1591955 ~ 1596479 (-) | True | htr2aa |
| XM_026911013.2 | mRNA | downstream | 235884 | 1554942 ~ 1566787 (-) | False | LOC113524666 |
| XM_026919622.2 | mRNA | upstream | 52331 | 1858262 ~ 1871493 (-) | True | cops8 |
| XM_034304738.1 | mRNA | upstream | 56222 | 1862153 ~ 1863790 (-) | True | trim63b |
| XM_026947295.2 | mRNA | upstream | 144201 | 1950132 ~ 1986039 (-) | True | ranbp2 |
| XM_026947297.2 | mRNA | upstream | 144201 | 1950132 ~ 1985889 (-) | False | ranbp2 |
| XM_026947296.2 | mRNA | upstream | 144201 | 1950132 ~ 1985889 (-) | False | ranbp2 |
| trnar-ucu_7 | other | downstream | 128098 | 1674484 ~ 1674573 (-) | True | trnar-ucu_7 |
| trnat-agu_8 | other | downstream | 128486 | 1674112 ~ 1674185 (-) | True | trnat-agu_8 |
| trnar-ucu_6 | other | downstream | 140062 | 1662520 ~ 1662609 (-) | True | trnar-ucu_6 |
| trnat-agu_7 | other | downstream | 152545 | 1650053 ~ 1650126 (-) | True | trnat-agu_7 |
| trnar-ucu_5 | other | downstream | 163819 | 1638763 ~ 1638852 (-) | True | trnar-ucu_5 |
| TU90190 | other | upstream | 243092 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| XR_004578243.1 | other | upstream | 996956 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | upstream | 998617 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| trnas-cga | other | upstream | 1133390 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| TU90967 | other | upstream | 2007548 | 3813479 ~ 3816036 (-) | False | faima |
