Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90097 |
| length | 446 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G75925 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1911196 ~ 1917438 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90018 | lncRNA | downstream | 37527 | 1849237 ~ 1873669 (-) | False | G75880 |
| TU90017 | lncRNA | downstream | 60972 | 1849237 ~ 1850224 (-) | True | G75880 |
| TU90044 | lncRNA | downstream | 92013 | 1807625 ~ 1819183 (-) | False | G75889 |
| TU90039 | lncRNA | downstream | 92013 | 1810898 ~ 1819183 (-) | False | G75889 |
| TU90040 | lncRNA | downstream | 93286 | 1801272 ~ 1817910 (-) | False | G75889 |
| TU90126 | lncRNA | upstream | 28535 | 1945973 ~ 1946176 (-) | True | G75947 |
| TU90223 | lncRNA | upstream | 196752 | 2114190 ~ 2114599 (-) | True | G76013 |
| TU90277 | lncRNA | upstream | 354429 | 2271867 ~ 2274639 (-) | True | G76057 |
| TU90288 | lncRNA | upstream | 383283 | 2300721 ~ 2300940 (-) | True | G76060 |
| TU90329 | lncRNA | upstream | 532281 | 2449719 ~ 2450949 (-) | True | G76093 |
| XM_026919622.2 | mRNA | downstream | 39703 | 1858262 ~ 1871493 (-) | True | cops8 |
| XM_034304738.1 | mRNA | downstream | 47406 | 1862153 ~ 1863790 (-) | True | trim63b |
| XM_034304840.1 | mRNA | downstream | 164165 | 1723257 ~ 1747031 (-) | True | mlphb |
| XM_026911002.2 | mRNA | downstream | 287147 | 1615900 ~ 1624049 (-) | True | med4 |
| XM_026911019.2 | mRNA | downstream | 314717 | 1591955 ~ 1596479 (-) | True | htr2aa |
| XM_026947295.2 | mRNA | upstream | 32694 | 1950132 ~ 1986039 (-) | True | ranbp2 |
| XM_026947297.2 | mRNA | upstream | 32694 | 1950132 ~ 1985889 (-) | False | ranbp2 |
| XM_026947296.2 | mRNA | upstream | 32694 | 1950132 ~ 1985889 (-) | False | ranbp2 |
| XM_026947298.2 | mRNA | upstream | 71102 | 1988540 ~ 1998073 (-) | True | lims2 |
| XM_034304747.1 | mRNA | upstream | 130341 | 2047779 ~ 2064298 (-) | False | LOC113547075 |
| TU90050 | other | downstream | 107551 | 1797982 ~ 1803645 (-) | True | G75893 |
| trnar-ucu_7 | other | downstream | 236623 | 1674484 ~ 1674573 (-) | True | trnar-ucu_7 |
| trnat-agu_8 | other | downstream | 237011 | 1674112 ~ 1674185 (-) | True | trnat-agu_8 |
| trnar-ucu_6 | other | downstream | 248587 | 1662520 ~ 1662609 (-) | True | trnar-ucu_6 |
| trnat-agu_7 | other | downstream | 261070 | 1650053 ~ 1650126 (-) | True | trnat-agu_7 |
| TU90190 | other | upstream | 131585 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| XR_004578243.1 | other | upstream | 885449 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | upstream | 887110 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| trnas-cga | other | upstream | 1021883 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| TU90967 | other | upstream | 1896041 | 3813479 ~ 3816036 (-) | False | faima |
