Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU90288 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G76060 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 2300721 ~ 2300940 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90277 | lncRNA | downstream | 26082 | 2271867 ~ 2274639 (-) | True | G76057 |
| TU90223 | lncRNA | downstream | 186122 | 2114190 ~ 2114599 (-) | True | G76013 |
| TU90126 | lncRNA | downstream | 354545 | 1945973 ~ 1946176 (-) | True | G75947 |
| TU90099 | lncRNA | downstream | 375468 | 1913131 ~ 1925253 (-) | True | G75926 |
| TU90097 | lncRNA | downstream | 383283 | 1911196 ~ 1917438 (-) | True | G75925 |
| TU90329 | lncRNA | upstream | 148779 | 2449719 ~ 2450949 (-) | True | G76093 |
| TU90634 | lncRNA | upstream | 229714 | 2530654 ~ 2530992 (-) | True | G76333 |
| TU90626 | lncRNA | upstream | 255566 | 2556506 ~ 2559152 (-) | True | G76325 |
| TU90615 | lncRNA | upstream | 383576 | 2684516 ~ 2753806 (-) | False | ifngr2 |
| XR_004578280.1 | lncRNA | upstream | 592436 | 2893376 ~ 2897204 (-) | True | LOC117597440 |
| XM_026936339.2 | mRNA | downstream | 54101 | 2234810 ~ 2246620 (-) | False | LOC113540088 |
| XM_026936346.2 | mRNA | downstream | 54106 | 2234810 ~ 2246615 (-) | False | LOC113540088 |
| XM_034304219.1 | mRNA | downstream | 54112 | 2234810 ~ 2246609 (-) | False | LOC113540088 |
| XM_034304213.1 | mRNA | downstream | 54112 | 2234810 ~ 2246609 (-) | False | LOC113540088 |
| XM_034304212.1 | mRNA | downstream | 54112 | 2234810 ~ 2246609 (-) | False | LOC113540088 |
| XM_026936246.2 | mRNA | upstream | 180654 | 2481594 ~ 2522383 (-) | False | LOC113540058 |
| XM_034304201.1 | mRNA | upstream | 182090 | 2483030 ~ 2522385 (-) | True | LOC113540058 |
| XM_034304837.1 | mRNA | upstream | 365916 | 2666856 ~ 2680900 (-) | True | il1rl1 |
| XM_034304836.1 | mRNA | upstream | 365916 | 2666856 ~ 2678131 (-) | False | il1rl1 |
| XM_026945240.2 | mRNA | upstream | 383568 | 2684508 ~ 2698756 (-) | True | ifngr2 |
| TU90190 | other | downstream | 251336 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| TU90050 | other | downstream | 497076 | 1797982 ~ 1803645 (-) | True | G75893 |
| trnar-ucu_7 | other | downstream | 626148 | 1674484 ~ 1674573 (-) | True | trnar-ucu_7 |
| trnat-agu_8 | other | downstream | 626536 | 1674112 ~ 1674185 (-) | True | trnat-agu_8 |
| trnar-ucu_6 | other | downstream | 638112 | 1662520 ~ 1662609 (-) | True | trnar-ucu_6 |
| XR_004578243.1 | other | upstream | 501947 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | upstream | 503608 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| trnas-cga | other | upstream | 638381 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| TU90967 | other | upstream | 1512539 | 3813479 ~ 3816036 (-) | False | faima |
| TU91765 | other | upstream | 2539020 | 4839960 ~ 4844879 (-) | True | G77283 |
