Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU91180 |
| length | 215 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G76794 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 4005694 ~ 4005908 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU91057 | lncRNA | downstream | 37617 | 3967873 ~ 3968077 (-) | True | G76688 |
| TU91051 | lncRNA | downstream | 67694 | 3937794 ~ 3938000 (-) | True | G76682 |
| TU91019 | lncRNA | downstream | 153487 | 3851396 ~ 3852207 (-) | True | G76658 |
| TU90966 | lncRNA | downstream | 189658 | 3809192 ~ 3816036 (-) | True | faima |
| TU90968 | lncRNA | downstream | 200097 | 3786956 ~ 3805597 (-) | False | faima |
| TU91182 | lncRNA | upstream | 1529 | 4007437 ~ 4007795 (-) | True | G76796 |
| TU91199 | lncRNA | upstream | 37026 | 4042934 ~ 4043196 (-) | True | G76813 |
| TU91231 | lncRNA | upstream | 236345 | 4242253 ~ 4242524 (-) | True | G76845 |
| TU91240 | lncRNA | upstream | 259745 | 4265653 ~ 4270345 (-) | True | G76852 |
| TU91246 | lncRNA | upstream | 277645 | 4283553 ~ 4284394 (-) | True | G76858 |
| XM_026936728.2 | mRNA | downstream | 82420 | 3892480 ~ 3923274 (-) | True | gypc |
| XM_034304686.1 | mRNA | downstream | 189635 | 3810514 ~ 3816059 (-) | False | faima |
| XM_026934130.2 | mRNA | downstream | 221301 | 3770234 ~ 3784393 (-) | False | parp14rs1 |
| XM_026910834.2 | mRNA | upstream | 284164 | 4290072 ~ 4294136 (-) | True | sfrp2 |
| XM_034304750.1 | mRNA | upstream | 326987 | 4332895 ~ 4333842 (-) | True | LOC113535176 |
| XM_026927891.2 | mRNA | upstream | 408135 | 4414043 ~ 4469641 (-) | True | tmem163a |
| XM_034304391.1 | mRNA | upstream | 499383 | 4505291 ~ 4515439 (-) | False | map3k19 |
| XM_034304390.1 | mRNA | upstream | 499383 | 4505291 ~ 4515439 (-) | False | map3k19 |
| TU90967 | other | downstream | 189658 | 3813479 ~ 3816036 (-) | False | faima |
| trnas-cga | other | downstream | 1066292 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| XR_004578243.1 | other | downstream | 1199831 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| XR_004578242.1 | other | downstream | 1199831 | 2804548 ~ 2805863 (-) | False | LOC113541352 |
| TU90190 | other | downstream | 1956309 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| TU91765 | other | upstream | 834052 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU92001 | other | upstream | 1325676 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| XR_004578179.1 | other | upstream | 2317245 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU92645 | other | upstream | 2523138 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92652 | other | upstream | 2523138 | 6529046 ~ 6565037 (-) | False | G78058 |
