Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU91872 |
| length | 627 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G77372 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 5025637 ~ 5042889 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU91866 | lncRNA | downstream | 15324 | 5009583 ~ 5010313 (-) | True | G77366 |
| TU91774 | lncRNA | downstream | 146044 | 4853056 ~ 4879593 (-) | True | G77291 |
| TU91572 | lncRNA | downstream | 387086 | 4638347 ~ 4638551 (-) | True | G77130 |
| TU91549 | lncRNA | downstream | 419958 | 4605305 ~ 4605679 (-) | True | G77107 |
| TU91479 | lncRNA | downstream | 531918 | 4491923 ~ 4493719 (-) | True | G77040 |
| TU91882 | lncRNA | upstream | 7696 | 5050585 ~ 5059601 (-) | True | G77381 |
| TU91889 | lncRNA | upstream | 29552 | 5072441 ~ 5135333 (-) | True | G77388 |
| TU91852 | lncRNA | upstream | 69383 | 5112272 ~ 5143128 (-) | True | G77353 |
| TU91898 | lncRNA | upstream | 94044 | 5136933 ~ 5207031 (-) | True | G77397 |
| TU92000 | lncRNA | upstream | 288009 | 5330898 ~ 5331387 (-) | True | G77496 |
| XM_026928294.2 | mRNA | downstream | 165287 | 4850639 ~ 4860350 (-) | False | ubxn4 |
| XM_026928293.2 | mRNA | downstream | 165287 | 4850639 ~ 4860350 (-) | True | ubxn4 |
| XM_026928066.2 | mRNA | downstream | 196125 | 4822232 ~ 4829512 (-) | False | nmi |
| XM_026928065.2 | mRNA | downstream | 196125 | 4822232 ~ 4829512 (-) | True | nmi |
| XM_026928521.2 | mRNA | downstream | 248165 | 4769724 ~ 4777472 (-) | False | LOC113535278 |
| XM_026928459.2 | mRNA | upstream | 48420 | 5091309 ~ 5103522 (-) | True | epc2 |
| XM_026928134.2 | mRNA | upstream | 72499 | 5115388 ~ 5158822 (-) | False | acvr2aa |
| XM_026928133.2 | mRNA | upstream | 72499 | 5115388 ~ 5158822 (-) | True | acvr2aa |
| XM_026928149.2 | mRNA | upstream | 397592 | 5440481 ~ 5481975 (-) | False | arhgap15 |
| XM_026928148.2 | mRNA | upstream | 397592 | 5440481 ~ 5481975 (-) | True | arhgap15 |
| TU91765 | other | downstream | 180758 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU90967 | other | downstream | 1209601 | 3813479 ~ 3816036 (-) | False | faima |
| trnas-cga | other | downstream | 2086235 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| XR_004578243.1 | other | downstream | 2219774 | 2802887 ~ 2805863 (-) | False | LOC113541352 |
| TU92001 | other | upstream | 288695 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| XR_004578179.1 | other | upstream | 1280264 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
| TU92645 | other | upstream | 1486157 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU92652 | other | upstream | 1486157 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92666 | other | upstream | 1501229 | 6544118 ~ 6545953 (-) | False | LOC113534870 |
