Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578242.1 |
| length | 838 |
| RNA type | misc_RNA |
| GC content | 0.33 |
| exon number | 3 |
| gene id | LOC113541352 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 2801006 ~ 2805863 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90615 | lncRNA | downstream | 50742 | 2684516 ~ 2753806 (-) | False | ifngr2 |
| TU90626 | lncRNA | downstream | 245396 | 2556506 ~ 2559152 (-) | True | G76325 |
| TU90634 | lncRNA | downstream | 273556 | 2530654 ~ 2530992 (-) | True | G76333 |
| TU90329 | lncRNA | downstream | 353599 | 2449719 ~ 2450949 (-) | True | G76093 |
| TU90288 | lncRNA | downstream | 503608 | 2300721 ~ 2300940 (-) | True | G76060 |
| XR_004578280.1 | lncRNA | upstream | 87513 | 2893376 ~ 2897204 (-) | True | LOC117597440 |
| TU90707 | lncRNA | upstream | 108537 | 2914400 ~ 2917047 (-) | True | G76400 |
| TU90778 | lncRNA | upstream | 130218 | 2936081 ~ 2936563 (-) | True | G76455 |
| TU90786 | lncRNA | upstream | 159403 | 2965266 ~ 2966533 (-) | True | G76462 |
| TU90785 | lncRNA | upstream | 159532 | 2965395 ~ 2966533 (-) | False | G76462 |
| XM_026938205.2 | mRNA | downstream | 5546 | 2775840 ~ 2799002 (-) | True | crfb1 |
| XM_026938224.2 | mRNA | downstream | 5547 | 2775840 ~ 2799001 (-) | False | crfb1 |
| XM_026938233.2 | mRNA | downstream | 13833 | 2775840 ~ 2790715 (-) | False | crfb1 |
| XM_026937180.2 | mRNA | downstream | 32159 | 2760250 ~ 2772389 (-) | True | LOC113540598 |
| XM_026938258.2 | mRNA | downstream | 44343 | 2747570 ~ 2760205 (-) | True | LOC113541336 |
| XM_034304223.1 | mRNA | upstream | 17953 | 2823816 ~ 2829821 (-) | False | tyw5 |
| XM_026942700.2 | mRNA | upstream | 17953 | 2823816 ~ 2829565 (-) | True | tyw5 |
| XM_026937158.2 | mRNA | upstream | 113443 | 2919306 ~ 2920007 (-) | True | c5h2orf69 |
| XM_026939466.2 | mRNA | upstream | 122958 | 2928821 ~ 2953801 (-) | True | nabp1a |
| XM_026932051.2 | mRNA | upstream | 138411 | 2944274 ~ 2960366 (-) | True | cavin2a |
| TU90190 | other | downstream | 755163 | 2049023 ~ 2049385 (-) | False | LOC113547075 |
| TU90050 | other | downstream | 1000903 | 1797982 ~ 1803645 (-) | True | G75893 |
| trnar-ucu_7 | other | downstream | 1129975 | 1674484 ~ 1674573 (-) | True | trnar-ucu_7 |
| trnat-agu_8 | other | downstream | 1130363 | 1674112 ~ 1674185 (-) | True | trnat-agu_8 |
| trnar-ucu_6 | other | downstream | 1141939 | 1662520 ~ 1662609 (-) | True | trnar-ucu_6 |
| trnas-cga | other | upstream | 133458 | 2939321 ~ 2939402 (-) | True | trnas-cga |
| TU90967 | other | upstream | 1007616 | 3813479 ~ 3816036 (-) | False | faima |
| TU91765 | other | upstream | 2034097 | 4839960 ~ 4844879 (-) | True | G77283 |
| TU92001 | other | upstream | 2525721 | 5331584 ~ 5339633 (-) | False | LOC113534947 |
| XR_004578179.1 | other | upstream | 3517290 | 6323153 ~ 6324680 (-) | False | LOC117597343 |
