Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnal-caa_1 |
| length | 84 |
| RNA type | tRNA |
| GC content | 0.57 |
| exon number | 2 |
| gene id | trnal-caa_1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1258142 ~ 1258256 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89753 | lncRNA | downstream | 4046 | 1237221 ~ 1254096 (-) | True | G75663 |
| TU89722 | lncRNA | downstream | 42438 | 1209385 ~ 1215704 (-) | True | G75636 |
| TU89729 | lncRNA | downstream | 88449 | 1169459 ~ 1169693 (-) | True | G75640 |
| TU89714 | lncRNA | downstream | 117939 | 1135626 ~ 1140203 (-) | True | G75628 |
| TU89683 | lncRNA | downstream | 176736 | 1081207 ~ 1081406 (-) | True | G75600 |
| TU89783 | lncRNA | upstream | 47733 | 1305989 ~ 1306353 (-) | True | G75687 |
| TU89812 | lncRNA | upstream | 108126 | 1366382 ~ 1367066 (-) | True | G75713 |
| TU89818 | lncRNA | upstream | 117130 | 1375386 ~ 1377189 (-) | True | G75719 |
| TU89826 | lncRNA | upstream | 126602 | 1384858 ~ 1385522 (-) | True | G75727 |
| TU89831 | lncRNA | upstream | 134523 | 1392779 ~ 1395138 (-) | True | G75732 |
| XM_026911023.2 | mRNA | downstream | 70643 | 1170709 ~ 1187499 (-) | True | lcp1 |
| XM_034304297.1 | mRNA | downstream | 98804 | 1155119 ~ 1159338 (-) | False | rpl31 |
| XM_034304298.1 | mRNA | downstream | 98945 | 1155119 ~ 1159197 (-) | False | rpl31 |
| XM_026910536.2 | mRNA | downstream | 145591 | 1103040 ~ 1112551 (-) | True | LOC113524329 |
| XM_026910528.2 | mRNA | downstream | 300404 | 944319 ~ 957738 (-) | True | LOC113524324 |
| XM_034304768.1 | mRNA | upstream | 13151 | 1271407 ~ 1282002 (-) | True | ints6 |
| XM_034304769.1 | mRNA | upstream | 13151 | 1271407 ~ 1281420 (-) | False | ints6 |
| XM_034304700.1 | mRNA | upstream | 48698 | 1306954 ~ 1315333 (-) | True | dhrs12 |
| XM_026911029.2 | mRNA | upstream | 48699 | 1306955 ~ 1315330 (-) | False | dhrs12 |
| XM_034304180.1 | mRNA | upstream | 62007 | 1320263 ~ 1339222 (-) | True | rubcnl |
| trnaw-cca | other | downstream | 5148 | 1252923 ~ 1252994 (-) | True | trnaw-cca |
| trnal-cag_10 | other | downstream | 27473 | 1230587 ~ 1230669 (-) | True | trnal-cag_10 |
| trnas-uga_4 | other | downstream | 27752 | 1230309 ~ 1230390 (-) | True | trnas-uga_4 |
| XR_003402581.2 | other | downstream | 70643 | 1171881 ~ 1187499 (-) | False | lcp1 |
| TU89684 | other | downstream | 98873 | 1145297 ~ 1159269 (-) | True | rpl31 |
| trnan-guu_14 | other | upstream | 28797 | 1287053 ~ 1287127 (-) | True | trnan-guu_14 |
| trnat-agu_1 | other | upstream | 31471 | 1289727 ~ 1289800 (-) | True | trnat-agu_1 |
| trnan-guu_15 | other | upstream | 33330 | 1291586 ~ 1291660 (-) | True | trnan-guu_15 |
| trnat-agu_2 | other | upstream | 35615 | 1293871 ~ 1293944 (-) | True | trnat-agu_2 |
| trnan-guu_16 | other | upstream | 37440 | 1295696 ~ 1295770 (-) | True | trnan-guu_16 |
