Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnaw-cca_4 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | trnaw-cca_4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 1414668 ~ 1414739 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89837 | lncRNA | downstream | 491 | 1413842 ~ 1414177 (-) | True | G75736 |
| TU89834 | lncRNA | downstream | 18146 | 1396297 ~ 1396522 (-) | True | G75734 |
| TU89831 | lncRNA | downstream | 19530 | 1392779 ~ 1395138 (-) | True | G75732 |
| TU89826 | lncRNA | downstream | 29146 | 1384858 ~ 1385522 (-) | True | G75727 |
| TU89818 | lncRNA | downstream | 37479 | 1375386 ~ 1377189 (-) | True | G75719 |
| TU89838 | lncRNA | upstream | 18283 | 1433022 ~ 1433227 (-) | True | G75737 |
| TU89840 | lncRNA | upstream | 40260 | 1454999 ~ 1455287 (-) | True | G75739 |
| TU89841 | lncRNA | upstream | 52923 | 1467662 ~ 1467899 (-) | True | G75740 |
| TU89924 | lncRNA | upstream | 177332 | 1592071 ~ 1592274 (-) | False | htr2aa |
| TU89942 | lncRNA | upstream | 241634 | 1656373 ~ 1656848 (-) | True | G75814 |
| XM_026910995.2 | mRNA | downstream | 9877 | 1396684 ~ 1404791 (-) | True | esd |
| XM_034304180.1 | mRNA | downstream | 75446 | 1320263 ~ 1339222 (-) | True | rubcnl |
| XM_034304700.1 | mRNA | downstream | 99335 | 1306954 ~ 1315333 (-) | True | dhrs12 |
| XM_026911029.2 | mRNA | downstream | 99338 | 1306955 ~ 1315330 (-) | False | dhrs12 |
| XM_034304768.1 | mRNA | downstream | 132666 | 1271407 ~ 1282002 (-) | True | ints6 |
| XM_026911012.2 | mRNA | upstream | 115086 | 1529825 ~ 1552435 (-) | True | si:dkey-230p4.1 |
| XM_026911013.2 | mRNA | upstream | 140203 | 1554942 ~ 1566787 (-) | False | LOC113524666 |
| XM_034304412.1 | mRNA | upstream | 140203 | 1554942 ~ 1565392 (-) | True | LOC113524666 |
| XM_026911019.2 | mRNA | upstream | 177216 | 1591955 ~ 1596479 (-) | True | htr2aa |
| XM_026911002.2 | mRNA | upstream | 201161 | 1615900 ~ 1624049 (-) | True | med4 |
| trnal-caa_2 | other | downstream | 100242 | 1314314 ~ 1314426 (-) | True | trnal-caa_2 |
| trnan-guu_16 | other | downstream | 118898 | 1295696 ~ 1295770 (-) | True | trnan-guu_16 |
| trnat-agu_2 | other | downstream | 120724 | 1293871 ~ 1293944 (-) | True | trnat-agu_2 |
| trnan-guu_15 | other | downstream | 123008 | 1291586 ~ 1291660 (-) | True | trnan-guu_15 |
| trnat-agu_1 | other | downstream | 124868 | 1289727 ~ 1289800 (-) | True | trnat-agu_1 |
| trnat-agu_4 | other | upstream | 33452 | 1448191 ~ 1448264 (-) | True | trnat-agu_4 |
| trnak-uuu_2 | other | upstream | 56750 | 1471489 ~ 1471561 (-) | True | trnak-uuu_2 |
| TU89874 | other | upstream | 114331 | 1529070 ~ 1529513 (-) | True | G75770 |
| trnal-caa_7 | other | upstream | 154006 | 1568745 ~ 1568857 (-) | True | trnal-caa_7 |
| trnat-agu_6 | other | upstream | 223646 | 1638385 ~ 1638458 (-) | True | trnat-agu_6 |
