Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123617 |
| length | 483 |
| RNA type | TUCP |
| GC content | 0.60 |
| exon number | 2 |
| gene id | G104473 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 24623516 ~ 24711368 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123452 | lncRNA | downstream | 89097 | 24533737 ~ 24534419 (-) | True | G104320 |
| TU123423 | lncRNA | downstream | 139444 | 24480361 ~ 24484072 (-) | False | sipa1l3 |
| TU123422 | lncRNA | downstream | 139444 | 24480391 ~ 24484072 (-) | False | sipa1l3 |
| TU123411 | lncRNA | downstream | 158938 | 24414900 ~ 24464578 (-) | True | G104291 |
| TU123014 | lncRNA | downstream | 884777 | 23732870 ~ 23738739 (-) | True | rpl35a |
| TU123851 | lncRNA | upstream | 332418 | 25043786 ~ 25079487 (-) | False | tmem91 |
| TU123870 | lncRNA | upstream | 402609 | 25113977 ~ 25151156 (-) | False | G104694 |
| TU123871 | lncRNA | upstream | 434992 | 25146360 ~ 25151156 (-) | True | G104694 |
| XR_004578344.1 | lncRNA | upstream | 480689 | 25192057 ~ 25214790 (-) | True | LOC117597583 |
| TU123929 | lncRNA | upstream | 527742 | 25239110 ~ 25241770 (-) | True | G104747 |
| XM_026913529.2 | mRNA | downstream | 48841 | 24480302 ~ 24574675 (-) | True | sipa1l3 |
| XM_026913860.2 | mRNA | downstream | 145544 | 24469967 ~ 24477972 (-) | True | qpctla |
| XM_034305055.1 | mRNA | downstream | 181902 | 24436290 ~ 24441614 (-) | False | tbcb |
| XM_026914089.2 | mRNA | downstream | 181909 | 24436290 ~ 24441607 (-) | True | tbcb |
| XM_026914088.2 | mRNA | downstream | 181911 | 24436290 ~ 24441605 (-) | False | tbcb |
| XM_026914354.2 | mRNA | upstream | 27723 | 24739091 ~ 24750597 (-) | True | znf296 |
| XM_034305359.1 | mRNA | upstream | 40285 | 24751653 ~ 24764161 (-) | True | clasrp |
| XM_026913845.2 | mRNA | upstream | 40285 | 24751653 ~ 24764161 (-) | False | clasrp |
| XM_026913843.2 | mRNA | upstream | 40285 | 24751653 ~ 24764160 (-) | False | clasrp |
| XM_026914366.2 | mRNA | upstream | 56207 | 24767575 ~ 24776782 (-) | True | siae |
| XR_004578330.1 | other | downstream | 1013068 | 23590945 ~ 23610448 (-) | True | mmp23bb |
| XR_004578321.1 | other | downstream | 2316747 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578325.1 | other | downstream | 3610416 | 20995341 ~ 21013100 (-) | False | sertad3 |
| TU121422 | other | downstream | 3656606 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_003402829.1 | other | downstream | 4643257 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| XR_003402792.2 | other | upstream | 41244 | 24752612 ~ 24762781 (-) | False | clasrp |
| XR_003402763.2 | other | upstream | 673957 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| XR_003402762.2 | other | upstream | 673957 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| XR_003402764.2 | other | upstream | 673957 | 25385325 ~ 25485121 (-) | False | si:cabz01090165.1 |
| TU124615 | other | upstream | 1527962 | 26239330 ~ 26241005 (-) | True | G105376 |
