Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU124743 |
| length | 981 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 6 |
| gene id | LOC113526510 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 26569085 ~ 26608339 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU124618 | lncRNA | downstream | 261524 | 26320032 ~ 26320770 (-) | True | G105379 |
| TU124447 | lncRNA | downstream | 494599 | 26087480 ~ 26087695 (-) | True | G105219 |
| TU124309 | lncRNA | downstream | 746256 | 25833279 ~ 25836038 (-) | True | G105092 |
| TU123932 | lncRNA | downstream | 1337050 | 25243472 ~ 25245244 (-) | True | G104750 |
| TU123936 | lncRNA | downstream | 1338277 | 25243472 ~ 25244017 (-) | False | G104750 |
| TU124869 | lncRNA | upstream | 135374 | 26743703 ~ 26743960 (-) | True | G105608 |
| TU124872 | lncRNA | upstream | 137790 | 26746119 ~ 26746339 (-) | True | G105611 |
| TU124897 | lncRNA | upstream | 179611 | 26787940 ~ 26788856 (-) | True | G105634 |
| TU124902 | lncRNA | upstream | 211137 | 26819466 ~ 26819717 (-) | True | G105639 |
| TU124929 | lncRNA | upstream | 267266 | 26875595 ~ 26875834 (-) | True | G105666 |
| XM_026913357.2 | mRNA | downstream | 50159 | 26515521 ~ 26532135 (-) | True | ube2q1 |
| XM_026913358.2 | mRNA | downstream | 50160 | 26515521 ~ 26532134 (-) | False | ube2q1 |
| XM_026913597.2 | mRNA | downstream | 117349 | 26324381 ~ 26464945 (-) | False | zgc:158464 |
| XM_026913596.2 | mRNA | downstream | 117350 | 26324381 ~ 26464944 (-) | True | zgc:158464 |
| XM_026913600.2 | mRNA | downstream | 117351 | 26324381 ~ 26464943 (-) | False | zgc:158464 |
| XM_034305136.1 | mRNA | upstream | 58938 | 26667267 ~ 26691735 (-) | True | rec114 |
| XM_026913543.2 | mRNA | upstream | 72027 | 26680356 ~ 26691735 (-) | False | rec114 |
| XM_034305137.1 | mRNA | upstream | 72027 | 26680356 ~ 26691735 (-) | False | rec114 |
| XM_026913542.2 | mRNA | upstream | 72027 | 26680356 ~ 26691735 (-) | False | rec114 |
| XM_026913390.2 | mRNA | upstream | 218695 | 26827024 ~ 26847963 (-) | True | pkma |
| TU124615 | other | downstream | 341289 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402763.2 | other | downstream | 1033366 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| XR_003402762.2 | other | downstream | 1033366 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| XR_003402764.2 | other | downstream | 1097173 | 25385325 ~ 25485121 (-) | False | si:cabz01090165.1 |
| XR_003402792.2 | other | downstream | 1819513 | 24752612 ~ 24762781 (-) | False | clasrp |
| TU125182 | other | upstream | 543983 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU126682 | other | upstream | 3093823 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 3735202 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 4121629 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 4208250 | 30816579 ~ 30819614 (-) | True | G107803 |
